chicken.big.ac.cn
BGI-Chicken Varaiation Database
http://chicken.big.ac.cn/chicken/jsp/services.jsp
Enter your search terms. Mirror in Fudan University. BGF (BGI Gene Finder), developed by the Gene Finding Team at BGI, is a program for gene identification in eukaryotic genomic DNA sequences. It is based on Dynamic Programming and HSMM (Hidden Semi-Markov Model) algorithm. The data set has been well trained with a special emphasis on chicken genome. Other self-developed softwares like online submission tool for mutual data interrogation will be available soon.
chicken.big.ac.cn
BGI-Chicken Varaiation Database
http://chicken.big.ac.cn/chicken/jsp/navigation.jsp
Enter your search terms. Bejing Genomics Institute Tel:86-010-80481184 Fax:86-010-80498676 Feedback. Supported by China National Grid Project 2002AA104250.
chicken.big.ac.cn
BGI-Chicken Varaiation Database
http://chicken.big.ac.cn/chicken/jsp/about.jsp
Enter your search terms. On March 1, 2004, Beijing Genomics Institute ( BGI. Of Chinese Academy of Sciences ( CAS. Bejing Genomics Institute Tel:86-010-80481184 Fax:86-010-80498676 Feedback. Supported by China National Grid Project 2002AA104250.
chicken.big.ac.cn
BGI-Chicken Varaiation Database
http://chicken.big.ac.cn/chicken/jsp/help.jsp
Enter your search terms. Search SNPs by SNP name, e.g. snp.173.90.2994.I.2. Eg chr1:1-100 000, to search SNPs located in chromosome 1 from 1 bp to 100,000 bp. SNPs detected in one of the three chicken strains of broiler/layer/Silkie. Quality Score in Reference. Quality Score in Read. Search SNPs on a given gene by gene name, e.g. riken1 5j5. Search SNPs on a given read by read name, e.g. rchsxb0 104909.y1.scf. Search genes by Gene Ontology identifier, e.g. GO:0006808. References with emphasis on chicken ...
chicken.big.ac.cn
BGI-Chicken Varaiation Database
http://chicken.big.ac.cn/index.jsp
Enter your search terms. To facilitate the application of our data to avian genetics and to provide a foundation for functional and evolutionary studies, we implemented the Chicken Variation Database (ChickVD) timely. ChickVD hosts the high-quality sequence variation data, variation analysis in the context of chicken genes, cDNAs, chicken orthologs of human disease genes, genetic markers, quantitative trait loci (QTLs). 149; 1,397,577 SNPs are associated with 33,566 Genes. Nature 432, 695-716 (2004) ( PDF.
chicken.big.ac.cn
BGI-Chicken Varaiation Database
http://chicken.big.ac.cn/chicken/jsp/download.jsp
Enter your search terms. Genomic Sequences of Chromosomes. All the Chromosomes FTP1. List of the Chromosomes. Nucleotide Sequences of Genes/cDNAs. Orthologs of Human Disease Genes FTP1. Amino Acid Sequences of Genes/cDNAs. Orthologs of Human Disease Genes FTP1. Chromosome Feature Stat. Table FTP1. Gene/cDNA Annotation of Chromosomes:. Orthologs of Human Disease Genes FTP1. SNP Annotation of Chromosomes. SNPs in Broiler FTP1. SNPs in Layer FTP1. SNPs in Silkie FTP1. SNP Annotation of Genes:.
chicken.genomics.org.cn
BGI-Chicken Varaiation Database
http://chicken.genomics.org.cn//index.jsp
Enter your search terms. To facilitate the application of our data to avian genetics and to provide a foundation for functional and evolutionary studies, we implemented the Chicken Variation Database (ChickVD) timely. ChickVD hosts the high-quality sequence variation data, variation analysis in the context of chicken genes, cDNAs, chicken orthologs of human disease genes, genetic markers, quantitative trait loci (QTLs). 149; 1,397,577 SNPs are associated with 33,566 Genes. Nature 432, 695-716 (2004) ( PDF.
chicken.genomics.org.cn
BGI-Chicken Varaiation Database
http://chicken.genomics.org.cn/chicken/jsp/help.jsp
Enter your search terms. Search SNPs by SNP name, e.g. snp.173.90.2994.I.2. Eg chr1:1-100 000, to search SNPs located in chromosome 1 from 1 bp to 100,000 bp. SNPs detected in one of the three chicken strains of broiler/layer/Silkie. Quality Score in Reference. Quality Score in Read. Search SNPs on a given gene by gene name, e.g. riken1 5j5. Search SNPs on a given read by read name, e.g. rchsxb0 104909.y1.scf. Search genes by Gene Ontology identifier, e.g. GO:0006808. References with emphasis on chicken ...
chicken.genomics.org.cn
BGI-Chicken Varaiation Database
http://chicken.genomics.org.cn/chicken/jsp/about.jsp
Enter your search terms. On March 1, 2004, Beijing Genomics Institute ( BGI. Of Chinese Academy of Sciences ( CAS. Bejing Genomics Institute Tel:86-010-80481184 Fax:86-010-80498676 Feedback. Supported by China National Grid Project 2002AA104250.
chicken.big.ac.cn
BGI-Chicken Varaiation Database
http://chicken.big.ac.cn/chicken/jsp/data.jsp
Enter your search terms. 149; 3,624,831 sequence variation sites identified, including 1,190,072 in the Broiler, 1,009,693 in Layer and 1,425,066 in Silkie. 149; 35,647 genes or full length cDNAs, including 2,068 GenBank genes, 28,416 Ensembl gene annotations, 1,825 Riken1 full-length cDNAs, 1,943 BBSRC full-length cDNAs, 995 chicken orthologs of human disease genes etc. 149; 1,397,577 SNPs are associated with 33,566 Genes. 149; 2,544,985 raw sequence traces, among which 1,205,058 are SNP-associated.
