
acgt.me
ACGTACGT: a blog that discusses various issues relating to genomics and bioinformatics by Keith Bradnam
http://www.acgt.me/
ACGT: a blog that discusses various issues relating to genomics and bioinformatics by Keith Bradnam
http://www.acgt.me/
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ACGT | acgt.me Reviews
https://acgt.me
ACGT: a blog that discusses various issues relating to genomics and bioinformatics by Keith Bradnam
The Grand Locus
http://blog.thegrandlocus.com/tag/gumbel
Life for statistical sciences. June babies and bioinformatics. Filed under extreme value fallacy. 8226; 06 April 2014 •. In July 1982, paleontologist Steven Jay Gould. Was diagnosed with cancer. Facing a median prognosis of only 8 months survival, he used his knowledge of statistics to prepare for the future. As he explains in The Median Isn’t the Message. If half of the patients died of this rare case of mesothelioma. If not the median. Then what is the message? June babies and anorexia.
Once upon a BLAST | The Grand Locus
http://blog.thegrandlocus.com/2014/06/once-upon-a-blast
Life for statistical sciences. Once upon a BLAST. Filed under series: focus on. 8226; 30 June 2014 •. Point well taken. But this unspoken academic pact has sealed what I call the. In simple words, the curse is that by putting all the emphasis on the results, researchers become blind to the research. Because they never discuss it. How to carry out good research? How to discover things? These are the questions that nobody raises (well, almost. Where did I leave off? Is the director of the NCBI. Dynamic] al...
You really should be reading acgt.me. Stop already and go read it.
http://toddharris.net/blog/2015/04/02/you-really-should-be-reading-acgt-me-stop-already-and-go-read-it
Todd Harris, PhD. Facilitating scientific discovery at the intersection of genetics, genomics, bioinformatics, big data, cloud computing, and open science. You really should be reading acgt.me. Stop already and go read it. April 2, 2015. If you don’t already, you really should be reading Keith Bradnam’s ACGT. Keith is the creator of the hilarious Just Another Bogus Bioinformatics Acronym (JABBA) Awards. He also does the 101 questions with a bioinformatician. And check it out. And do follow kbradnam.
acgt
http://toddharris.net/blog/tag/acgt
Todd Harris, PhD. Facilitating scientific discovery at the intersection of genetics, genomics, bioinformatics, big data, cloud computing, and open science. You really should be reading acgt.me. Stop already and go read it. April 2, 2015. If you don’t already, you really should be reading Keith Bradnam’s ACGT. Keith is the creator of the hilarious Just Another Bogus Bioinformatics Acronym (JABBA) Awards. He also does the 101 questions with a bioinformatician. And check it out. And do follow kbradnam.
Longest runs and DNA alignments | The Grand Locus
http://blog.thegrandlocus.com/2014/12/longest-runs-and-dna-alignments
Life for statistical sciences. Longest runs and DNA alignments. Filed under sequence alignment. 8226; 31 December 2014 •. It also holds for PacBio and Oxford Nanopore by the way). The problem of sequence alignment. Gets a lot of attention from bioinformaticians (the list of alignment software. Counts more than 200 entries). Yet, the statistical aspect of the problem is often neglected. In the post Once upon a BLAST. David Lipman explained that the breakthrough of BLAST. Longest runs of 1s. P(X 0 leq x) a...
bioinformatics
http://toddharris.net/blog/category/bioinformatics
Todd Harris, PhD. Facilitating scientific discovery at the intersection of genetics, genomics, bioinformatics, big data, cloud computing, and open science. The Worm Reader’s Gazette: audio transcripts of the scientific literature. April 1, 2016. Then we think you’ll love the Worm Reader’s Gazette. The Worm Breeder’s Gazette. Is pleased to announce the Worm Reader’s Gazette. Audio recordings of scientific literature read aloud by lead authors, now in private invite only alpha testing. Borrowing from the p...
The Grand Locus
http://blog.thegrandlocus.com/tag/benchmark
Life for statistical sciences. Filed under software pollution. 8226; 20 May 2015 •. I never planned to do bioinformatics. It just happened because I liked the time in front of my computer. Still, as every sane individual, I sometimes think that I could do something else with my life, and I wonder whether I am doing the right thing. On this topic, I recently came across the famous farewell to bioinformatics. By Frederick J. Ross. There are indeed many issues in the bioinformatics community and I.
The Grand Locus
http://blog.thegrandlocus.com/tag/statistics
Life for statistical sciences. Did Mendel fake his results? 8226; 11 April 2016 •. You went to high school and you learned genetics. You heard about a certain Gregor Mendel. But then you came to the conclusion that he just got lucky and that he was right for the wrong reasons. After all, he was just a monk on gardening duties, why would you expect him to understand anything about real science? Read more ». Bayesian networks and causation. 8226; 20 June 2015 •. However, for Judea Pearl. The key idea is th...
The Grand Locus
http://blog.thegrandlocus.com/tag/bayesian-networks
Life for statistical sciences. Bayesian networks and causation. 8226; 20 June 2015 •. However, for Judea Pearl. This is not a satisfactory answer. In his book Causality: Models, Reasoning, and Inference. He expresses his opinion vividly. I see no greater impediment to scientific progress than the prevailing practice of focusing all our mathematical resources on probabilistic and statistical inferences while leaving causal considerations to the mercy of intuition and good judgment. Read more ».
The Grand Locus
http://blog.thegrandlocus.com/tag/bioinformatics
Life for statistical sciences. A tutorial on Burrows-Wheeler indexing methods. Filed under Burrows-Wheeler transform. 8226; 04 July 2016 •. There are many resources explaining how the Burrows-Wheeler transform works and how it can be used to index a text, but so far I have not found anything explaining what makes it so awesome. I figured I would write a tutorial like this for those who are not afraid of the detail. The first idea would be to use. Read more ». Stick breaking and DNA alignment. Upon closer...
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ACGT
We develop algorithms and tools for analysis of genomic and systems biology data. Areas include:. Methods for integrated analysis of gene expression, protein and genetic interactions, SNPs, etc. Modeling, dissection and inference of biological systems. Understanding mechanisms of transcription factor and microRNA control and evolution. Chromosomal aberrations in cancer, patient classification and biomarker selection in disease, disease genetics. Ron Shamir's personal homepage. Meet our group members.
Acgt.de
Melden Sie sich jetzt an und erhalten Sie regelmäßig Informationen über neue Produkte, Sonderangebote oder neue Gutscheine. Gekennzeichnete Felder sind Pflichtfelder. Years of the 19th Century in Rugby Union: 1870 in Rugby Union, 1871 in Rugby Union, 1872 in Rugby Union, 1873 in Rugby Union. Rugby Union at the Maccabiah: Rugby Union at the 2009 Maccabiah Games, Rugby Union at the Maccabiah Games. Teeburon To Rugby or not to Rugby, what a stupid question Mug. Herren, Schwarz, Motiv Keep Calm and play Rugb...
acgt.dk | tools and links for bioinformatics - alignment - prediction - markov models - hmm
ACGT: ACGT
Use an ACGT resource. Add my resource to ACGT. You are here: Home. View Summer 2010 Issue. If you want to subscribe to the ACGT newsletter, please send us an email. ACGT project ended end of July 2010. For more information please contact ACGT's coordinators:. Mrs Jessica Michel Assoumou. You can download ACGT's success stories videos by following the links below:. 666MB - 32:46 min]. 238MB - 8:34 min]. 97MB - 0:20 min]. Welcome to the ACGT website. News published on: Mon, Jul 12, 2010. Scientists and phy...
acgt.info
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ACGT
Thoughts on biology, genomics, and the ongoing threat to humanity from the bogus use of bioinformatics acronyms, by Keith Bradnam. Chromosome-Scale Scaffolds And The State of Genome Assembly →. March 31, 2017. Keith Robison has written another fantastic post on his Omics! Blog which is a great read for two reasons. First he looks at the issues regarding chromosome-size scaffolds that can now be produced with Hi-C sequencing approches. Hi-C (in vitro or in vivo). Rapid Physical Maps (BioNano Genomics).
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