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Alm Lab Website

The Alm lab develops. To engineer the human microbiome. Designed by Katherine Huang. Updated on November 6, 2014.

http://almlab.mit.edu/

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Alm Lab Website | almlab.mit.edu Reviews
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The Alm lab develops. To engineer the human microbiome. Designed by Katherine Huang. Updated on November 6, 2014.
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Alm Lab Website | almlab.mit.edu Reviews

https://almlab.mit.edu

The Alm lab develops. To engineer the human microbiome. Designed by Katherine Huang. Updated on November 6, 2014.

INTERNAL PAGES

almlab.mit.edu almlab.mit.edu
1

Alm Lab Software

http://almlab.mit.edu/software.html

Visualizing microbial community dyanmics. Scott Olesen and Sarah Preheim. Inferred biomass biogeochemical model of Mystic Lake. Distribution-based clustering (Sep 2014). Calling ecologically-informed operational taxonomic units. Symsim is a simple simulation of sympatric speciation in recombining microbial populations. Read more. STARRInIGHTS is a computational pipeline for inferring homologous recombination breakpoints inpopulations of closely related bacterial genomes. Learn more.

2

Alm Lab Website

http://almlab.mit.edu/index.html

The Alm lab develops. To engineer the human microbiome. Designed by Katherine Huang. Updated on December 9, 2015.

3

Alm Lab Publications

http://almlab.mit.edu/publications.html

Mobile genes in the human microbiome are structured from global to individual scales. Nature 2016. doi:10.1038/nature18927. Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers. ISME J. 2016 Feb; 10(2):427-36. Spencer SJ, Tamminen MV, Preheim SP, Guo MT, Briggs AW, Brito IL, A Weitz D, Pitknen LK, Vigneault F, Juhani Virta MP, Alm EJ. Computational and Systems Biology, Massachusetts Institute of Technology, Cambridge, MA, USA. Nature. 2014 Feb 19.

4

Alm Lab Press

http://almlab.mit.edu/press.html

Nov 10, 2015 (Citylab). A Microbial Map of the City. Jan 9, 2015 (Boston Globe). What does Cambridge sewage say about residents? MIT plans to find out. Nov 6, 2014 (MIT News). New interdisciplinary center at MIT to focus on the microbiome and human health. Feb 17, 2014 (New York Times). A New Kind of Transplant Bank. Feb 19, 2014 (Nature). Policy: How to regulate faecal transplants. Jul 24, 2012 (MIT News). DARPA, NIH to fund 'human body-on-a-chip' research. Jun 14, 2012 (Boston Globe).

5

Alm Lab Members

http://almlab.mit.edu/members.html

The human microbiome plays a key role in human health and disease. Research in my group includes both computational/theoretical and experimental approaches to understanding and engineering the human microbiome. Our research is focused on translating basic science discoveries rapidly into the clinic, where they can contribute to better outcomes for patients. Some areas of special interest include:. Developing therapeutics based on synthetic microbial communities. Smart Toilets that track human health.

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LINKS TO THIS WEBSITE

complex-life.org complex-life.org

Eric Alm

http://www.complex-life.org/team/eric-alm

Foundations of Complex Life. The MIT NASA Astrobiology Team. Massachusetts Institute of Technology. Website link: almlab.mit.edu. The Alm laboratory studies the evolution and ecology of microorganisms using high-throughput DNA sequencing and computational modeling. Special interest areas include the structure and assembly of ecosystems, microbial population genetics, and reconstructing the early history of life on Earth. Doherty Assistant Professor of Ocean Utilization, MIT 2008-2009.

cehs.mit.edu cehs.mit.edu

Members | CEHS

http://cehs.mit.edu/members

Skip to main content. Cite the Center Support. Past Pilot Project Recipients. Facilities Core Inquiry Form. NF: Postdoc Transition Seminar. The Center consist of 45 center members, of which 40 are faculty members and five are research members. Our membership crosses 9 departments. Harvard/MIT Division of Health Sciences and. Biological Engineering, Media Lab. John M. Essigmann. Biological Engineering, Chemistry. Biological Engineering, Division of Comparative Medicine. Civil and Environmental Engineering.

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Alm Lab Website

The Alm lab develops. To engineer the human microbiome. Designed by Katherine Huang. Updated on November 6, 2014.

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The Alm lab develops. To engineer the human microbiome. Designed by Katherine Huang. Updated on November 6, 2014.

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