New Voting Algorithm for Discovering Long Motifs. Version 1.07 (06 May 2005). Please send queries or comments to alse(AT)cs(DOT)hku(DOT)hk. ALSE is a software package that discovers the common patterns in a set of DNA sequences.
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ALSE - Motif Finding Tool | alse.cs.hku.hk Reviews
https://alse.cs.hku.hk
New Voting Algorithm for Discovering Long Motifs. Version 1.07 (06 May 2005). Please send queries or comments to alse(AT)cs(DOT)hku(DOT)hk. ALSE is a software package that discovers the common patterns in a set of DNA sequences.
alse.cs.hku.hk
ALSE - Motif Finding Tool
http://alse.cs.hku.hk/algorithm.html
ALSE Algorithm - An EM-like approach. The motif finding problem is to find common patterns of the binding sites for an unknown transcription factor from a set of sequences. There are different models to the motif-finding problem. However, they all share a common weakness. Only strong-signal sequencs are used as input, i.e. they cannot confirm that the discovered patterns may also occur in other background and un-related sequences, therefore, should not be considered motifs. But rarely appear in the set F.
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ALSE - Motif Finding Tool
New Voting Algorithm for Discovering Long Motifs. Version 1.07 (06 May 2005). Please send queries or comments to alse(AT)cs(DOT)hku(DOT)hk. ALSE is a software package that discovers the common patterns in a set of DNA sequences.
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