chicken.genouest.org
QTL « iChicken
http://chicken.genouest.org/tag/qtl
Bioinformatic Genetic and Genomic about chicken. AnnotQTL accepted for publication in the NAR 2011 webserver edition. 28 avril 2011 by Fred. NAR just have let us know that our manuscript of AnnotQTL has been accepted for publication. The manuscript will be online in 2-3 weeks! In addition to the first release of AnnotQTL, we have added several ‘missing’ features:. The assembly version and the date of the request are now inserted into the exported text file (TSV or XML). 8226; No Comments.
chicken.genouest.org
software « iChicken
http://chicken.genouest.org/category/software
Bioinformatic Genetic and Genomic about chicken. DGD accepted for publication in PLOS ONE. 1 décembre 2012 by Fred. The paper describing the construction and the content of this database had been accepted for publication and the article is now available on the PLOS ONE website. We improved the first release by adding data from GEO and GO database. These addition permitted to analyse the gene coexpression level and the annotation similarity inside each group of duplicated genes (see below). NAR just have ...
chicken.genouest.org
AnnotQTL accepted for publication in the NAR 2011 webserver edition « iChicken
http://chicken.genouest.org/software/annotqtl-accepted-for-publication-in-the-nar-2011-webserver-edition
Bioinformatic Genetic and Genomic about chicken. AnnotQTL accepted for publication in the NAR 2011 webserver edition. 28 avril 2011 by Fred. NAR just have let us know that our manuscript of AnnotQTL has been accepted for publication. The manuscript will be online in 2-3 weeks! In addition to the first release of AnnotQTL, we have added several ‘missing’ features:. The assembly version and the date of the request are now inserted into the exported text file (TSV or XML). 8226; No Comments.
chicken.genouest.org
Bioinformatic « iChicken
http://chicken.genouest.org/tag/bioinformatic
Bioinformatic Genetic and Genomic about chicken. Code more shell scripts (Part. II). 1 décembre 2012 by Fred. With NGS data, we are experiencing to handle very (very very) large datasets. Whatever the coding language used (PERL, python, C…), the open/read part of a program is (always) very slow. Thus, the debug process could really be a pain due to the time to read the file. Using system unix tools is one of the approach to cut /merge / debug / analyze the content of the files…. Easy, use (again) the tr.
chicken.genouest.org
PERL « iChicken
http://chicken.genouest.org/tag/perl
Bioinformatic Genetic and Genomic about chicken. 8 août 2011 by Fred. The Duplicated Gene Database website has been released! Http:/ dgd.genouest.org. 8226; No Comments. AnnotQTL accepted for publication in the NAR 2011 webserver edition. 28 avril 2011 by Fred. NAR just have let us know that our manuscript of AnnotQTL has been accepted for publication. The manuscript will be online in 2-3 weeks! In addition to the first release of AnnotQTL, we have added several ‘missing’ features:. We have also decided ...
chicken.genouest.org
Genetic « iChicken
http://chicken.genouest.org/tag/genetic
Bioinformatic Genetic and Genomic about chicken. Code more shell scripts (Part. II). 1 décembre 2012 by Fred. With NGS data, we are experiencing to handle very (very very) large datasets. Whatever the coding language used (PERL, python, C…), the open/read part of a program is (always) very slow. Thus, the debug process could really be a pain due to the time to read the file. Using system unix tools is one of the approach to cut /merge / debug / analyze the content of the files…. Easy, use (again) the tr.
chicken.genouest.org
Genomic « iChicken
http://chicken.genouest.org/tag/genomic
Bioinformatic Genetic and Genomic about chicken. 8 août 2011 by Fred. The Duplicated Gene Database website has been released! Http:/ dgd.genouest.org. 8226; No Comments. AnnotQTL accepted for publication in the NAR 2011 webserver edition. 28 avril 2011 by Fred. NAR just have let us know that our manuscript of AnnotQTL has been accepted for publication. The manuscript will be online in 2-3 weeks! In addition to the first release of AnnotQTL, we have added several ‘missing’ features:. We have also decided ...
nar.oxfordjournals.org
AnnotQTL: a new tool to gather functional and comparative information on a genomic region
http://nar.oxfordjournals.org/content/early/2011/05/19/nar.gkr361.abstract
View Current Issue (Volume 44 Issue 14 19 August 2016). Version of this article. Was published on 2011-06-29. AnnotQTL: a new tool to gather functional and comparative information on a genomic region. INRA, UMR598 Génétique Animale, F-35000 Rennes,. Agrocampus OUEST, UMR598 Génétique Animale, F-35000 Rennes,. GenOuest Platform, INRIA/Irisa Campus de Beaulieu, F-35042 Rennes Cedex and. Agrocampus OUEST, Applied Mathematics Department, F-35000, Rennes, France. Fax: (33) 2 23 48 54 70. February 9, 2011.