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How to run kallisto on NCBI SRA RNA-Seq data for differential expression using the mac terminal | genophoria
https://genophoria.wordpress.com/2015/05/13/how-to-run-kallisto-on-ncbi-sra-rna-seq-data-for-differential-expression-using-the-mac-terminal
Genomics euphoria: ramblings of a scientist on genetics, genomics and the meaning of life. How to run kallisto on NCBI SRA RNA-Seq data for differential expression using the mac terminal. On May 13, 2015. Very useful post on Kallisto. This post explains how to run the exceptionally fast RNA-seq k-mer aligner kallisto. From the Pachter lab on data you download from NCBI’s Short Read Archive. Kallisto is really fast and non-memory intensive, without sacrificing accuracy (at least, according to their paper.
Letters from the trenches of war on cancer (Part I) | genophoria
https://genophoria.wordpress.com/2014/07/15/letters-from-the-trenches-of-war-on-cancer-part-i
Genomics euphoria: ramblings of a scientist on genetics, genomics and the meaning of life. Letters from the trenches of war on cancer (Part I). On July 15, 2014. It is not news to anyone that I study the biology and regulation of RNA (see the two previous posts on this very blog: here. And Noam who published their work back in 2008. And with the help of my genius friend Hamed. We developed, benchmarked and validated a computational method named TEISER. Given the success of miRNA regulation and my previou...
RNA rises | genophoria
https://genophoria.wordpress.com/2014/03/23/the-rise-of-rna
Genomics euphoria: ramblings of a scientist on genetics, genomics and the meaning of life. On March 23, 2014. Roushkin et al. 2013, Nature. Last year the first ever large scale binding information for a compendium of RNA-binding proteins (RBPs) was published ( Ray et al, 2013, Nature. The computational methods are also gaining, from SeqFold ( Ouyang et al, 2013, Genome res. To our TEISER ( Goodarzi et al, 2012, Nature. Did I mention these are exciting times? Which I encourage you to read. Interesting...
Functional impacts of RNA modifications | genophoria
https://genophoria.wordpress.com/2015/08/30/functional-impacts-of-rna-modifications
Genomics euphoria: ramblings of a scientist on genetics, genomics and the meaning of life. Functional impacts of RNA modifications. On August 30, 2015. My good friend and all-around awesome scientist Claudio has been working on this very cool idea the fruits of which is now available to all. I had the pleasure of being on his team and I’m personally fascinated by the problem. The broad question that Claudio is tackling is “what to RNA modifications do in the cell? And I invite everyone to read this paper.
RNA Structurome | genophoria
https://genophoria.wordpress.com/2014/07/06/rna-structurome
Genomics euphoria: ramblings of a scientist on genetics, genomics and the meaning of life. On July 6, 2014. The late January issue of. Carried a few papers of this type for me. Rouskin et al. And Ding et al. Reported the use of DMS (dimethyl sulfate)-based modification of exposed ribonucleotide bases coupled with high-throughput sequencing to provide a snap-shot of RNA structural preferences. RNA structure determination. What I found intriguing, however, was how. Acting factors in RNA biology, however, t...
Confessions of a bad writer | genophoria
https://genophoria.wordpress.com/2014/09/28/confessions-of-a-bad-writer
Genomics euphoria: ramblings of a scientist on genetics, genomics and the meaning of life. Confessions of a bad writer. On September 28, 2014. 8220;One day I will find the right words, and they will be simple.” –Jack Kerouac. I am a bad writer! And a piece by Steven Pinker in chronicles of higher education. Your writing is bad, and you should feel bad… Dr. Zoidberg is judging you! A flowering mustard plant,” rather than the bare “. 8221; (which I’ve seen in many science papers).”. My argument is that wri...
genophoria | genophoria
https://genophoria.wordpress.com/author/genophoria
Genomics euphoria: ramblings of a scientist on genetics, genomics and the meaning of life. On July 13, 2016. Functional impacts of RNA modifications. On August 30, 2015. My good friend and all-around awesome scientist Claudio has been working on this very cool idea the fruits of which is now available to all. I had the pleasure of being on his team and I’m personally fascinated by the problem. The broad question that Claudio is tackling is “what to RNA modifications do in the cell? On May 13, 2015. And t...
Greetings from UCSF | genophoria
https://genophoria.wordpress.com/2016/07/13/greetings-from-ucsf
Genomics euphoria: ramblings of a scientist on genetics, genomics and the meaning of life. On July 13, 2016. Larr; Functional impacts of RNA modifications. 2 responses to “. July 14, 2016 at 2:19 pm. July 14, 2016 at 2:22 pm. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Address never made public). You are commenting using your WordPress.com account. ( Log Out. You are commenting using your Twitter account. ( Log Out. The Tree of Life.
RNA Structurome (part II) | genophoria
https://genophoria.wordpress.com/2015/04/19/rna-structurome-part-ii
Genomics euphoria: ramblings of a scientist on genetics, genomics and the meaning of life. RNA Structurome (part II). On April 19, 2015. Recently, two very great papers came out in Nature that I urge you to read:. Method, developed by the Howard Chang’s group at Stanford, which I think is the gold-standard for in vivo RNA structurome data. Larr; The two cultures of mathematics and biology. How to run kallisto on NCBI SRA RNA-Seq data for differential expression using the mac terminal →. I am an assistant...
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복돌이 뭐가 잘못된 . 복돌 인증 7일 정지 . 난 너의 몸을 분해해. 애퍼처 사이언스 연구소는 높은 기밀등급의 과학기술 실험에 참가할. 피실험자를 모집하고 있습니다. 피실험자는 장애물이 놓여진 상황에서. 출구를 찾는 것과 같은 간단한 과제를 수행하여야 합니다. 기밀 취급되는 기술의 특성상, 참가자는 계약서에 서명하는 순간부터,. 최소한 10년동안 애퍼처 사이언스 연구소의 피실험자로 있어야 합니다. 모든 피실험자에게는 케이크가 보상으로 주어집니다. 아래의 주소로 당신의 위치정보를 보내세요:. 엔딩(Ending) 마지막 Part - GLaDOS Fight. 엔딩(Ending) Part 3 - 도덕성 모듈. 엔딩(Ending) Part 2 - GLaDOS 활성화(Activation). 포탈 유즈맵: 12 Angry Tests. ERH - ABS O5 120 Harp. You Are A Dead Test Subject. 애퍼쳐 사이언스 미국 본사.
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Upgrade to paid account! We do what we must because we can! 09 October 2011 @ 11:13 pm. 40 Portal 2 icons of the Cooperative Testing Initiative bots, plus 9 more general ones for Plurk! 40] Kung Fu Panda. 40] Portal 9 Plurk icons. Right down this way! Powered by Last.fm. 23 July 2011 @ 04:33 am. 60 84 Icons (SPOILERS). Fragile Dreams: Farewell Ruins of the Moon. Find the rest here. And since I forgot to cross-post my previous batch of Portal icons:. 11 July 2011 @ 06:37 pm. 68} ( SPOILER WARNING! Not sur...
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WE DO WHAT WE MUST. 21/07/2008 at 6:51 PM. 27/07/2008 at 8:51 PM. Bonjour et bienvenue dans la campagne de. Soundtrack of My Life. Subscribe to my blog! Bonjour et bienvenue dans la campagne de. Communication de Aperture Science. Aperture Science Inc. fondée par Cave Johnson en 1958, avait pour vocation première la commercialisation de rideaux de douche et de produits pour salles de bain. Par la suite nous sommes devenus une holding internationale, centrée sur les activités de recherches. La matiere blan...
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this is a 5sos hate blog
This is a 5sos hate blog. Real life Michael Jones. In Loving Memory of Morgan Stringer (August 1, 1995 - March 3, 2013). Petewemtz is the love of my life #lonnsey. Song is your all-time favorite? Spencer smith in the ready to go music video reblog if you agree. Hearts; 507 — 5 hours ago. On 16 Aug 2015 — via spencerslegos. Hearts; 23544 — 8 hours ago. On 16 Aug 2015 — via zaynmaliik. I fuckign hate seeing ppl my age be successful because I am a bitter, jealous, and untalented individual. On 16 Aug 2015.
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Tuesday, July 6, 2010. Monday, July 5, 2010. No photos today, Ive got a nasty case of the flu. I promise some reception shots tomorrow. Thanks all for stopping by =). Sunday, July 4, 2010. More gorgeousness.and a little goof, too. Saturday, July 3, 2010. Friday, July 2, 2010. Thursday, July 1, 2010. More getting ready photos. Jackie did such a fabulous job on hair and makeup, the bride and bridesmaids were ethereal! Whitney, you rocked the camera, I love it! Wednesday, June 30, 2010.
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More options ▼. Subscribe to my blog. Created: 04/09/2013 at 11:10 AM. Updated: 11/12/2013 at 11:16 AM. Aperturesciences PL. ZAPP. Ce blog a spécialement été crée avec la participation de Gallimard Jeunesse Folio Junior et Valve Software.Ltd dans le but de renseigner le public sur les nouveautés et nouveaux ouvrages dont j'en aurais écrit l'ouvrage. Ce blog est en cours de construction ou de modification,. Il sera ouvert au public entre fin décembre 2014 - début 2015. Merci de votre compréhension :-).
Aperture Sciences | Where science and photography meet
Where science and photography meet. Skip to primary content. Skip to secondary content. March 14, 2012. Welcome to WordPress. This is your first post. Edit or delete it, then start blogging! Proudly powered by WordPress.
