apipetteandanopenmind.wordpress.com

A Pipette and an Open Mind

A Pipette and an Open Mind. November 5, 2015. For anyone who’s been following the Seagrass Microbiome Project. At this point, you may be asking,. What exactly are these super-useful, super-cool Winogradsky column things? Sergei Winogradsky, one of the founders of microbial ecology possessed both a great brain and a great mustache. (Some people have it all). Photo credit: Wikimedia Commons). For all their usefulness, the columns are surprisingly simple. The general recipe to make one is:. Add some microbe...

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A Pipette and an Open Mind | apipetteandanopenmind.wordpress.com Reviews

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A Pipette and an Open Mind. November 5, 2015. For anyone who’s been following the Seagrass Microbiome Project. At this point, you may be asking,. What exactly are these super-useful, super-cool Winogradsky column things? Sergei Winogradsky, one of the founders of microbial ecology possessed both a great brain and a great mustache. (Some people have it all). Photo credit: Wikimedia Commons). For all their usefulness, the columns are surprisingly simple. The general recipe to make one is:. Add some microbe...

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A Pipette and an Open Mind | apipetteandanopenmind.wordpress.com Reviews

https://apipetteandanopenmind.wordpress.com

A Pipette and an Open Mind. November 5, 2015. For anyone who’s been following the Seagrass Microbiome Project. At this point, you may be asking,. What exactly are these super-useful, super-cool Winogradsky column things? Sergei Winogradsky, one of the founders of microbial ecology possessed both a great brain and a great mustache. (Some people have it all). Photo credit: Wikimedia Commons). For all their usefulness, the columns are surprisingly simple. The general recipe to make one is:. Add some microbe...

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apipetteandanopenmind.wordpress.com

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Adventures With Qiime Part 1 | A Pipette and an Open Mind

https://apipetteandanopenmind.wordpress.com/2013/07/26/adventures-with-qiime-part-1

A Pipette and an Open Mind. JContextExplorer 2.0 →. Adventures With Qiime Part 1. July 26, 2013. So I’m in the process of learning how to use Qiime. Pronounced ‘Chime,’ don’t ask me why). Qiime is a powerful program that can do many, many things, but I’m primarily using it to sort 16s. The data set I’m using to familiarize myself with Qiime comes from seagrass samples, but I’m not looking at the seagrass DNA. I’m actually looking at the DNA of the microbes (specifically the bacteria...The first thing I d...

2

Winogradsky Columns! | A Pipette and an Open Mind

https://apipetteandanopenmind.wordpress.com/2015/11/05/winogradsky-columns

A Pipette and an Open Mind. Visualizing Microbiome Data: Choropleth Style. November 5, 2015. For anyone who’s been following the Seagrass Microbiome Project. At this point, you may be asking,. What exactly are these super-useful, super-cool Winogradsky column things? Sergei Winogradsky, one of the founders of microbial ecology possessed both a great brain and a great mustache. (Some people have it all). Photo credit: Wikimedia Commons). For all their usefulness, the columns are surprisingly simple. T...

3

“A leaf is not a petri dish” (a lesson from Steven Lindow) | A Pipette and an Open Mind

https://apipetteandanopenmind.wordpress.com/2013/12/29/a-leaf-is-not-a-petri-dish-a-lesson-from-steven-lindow

A Pipette and an Open Mind. Musings from the Davis Undergraduate Research Conference →. 8220;A leaf is not a petri dish” (a lesson from Steven Lindow). December 29, 2013. Earlier this quarter I had the fortune to attend a guest lecture by Steven Lindow of UC Berkeley. Lindow is a renowned expert in plant-microbiology who has worked on some pretty cool projects over the years (he was one of the first to work with ice-causing bacteria. In many cases, competition with local well-adapted wildlife can discour...

4

My Lab Notebook | A Pipette and an Open Mind

https://apipetteandanopenmind.wordpress.com/my-lab-notebook

A Pipette and an Open Mind. An online version of my personal lab notebook. The posts are here. And you can find the protocols I’ve regularly used here. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Address never made public). You are commenting using your WordPress.com account. ( Log Out. You are commenting using your Twitter account. ( Log Out. You are commenting using your Facebook account. ( Log Out. Notify me of new comments via email.

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Publications | A Pipette and an Open Mind

https://apipetteandanopenmind.wordpress.com/publications

A Pipette and an Open Mind. Coil DA, Badger JH, Dmitrov GI, Khouri H, Ward NL, Robb FT, Eisen JA. 2014. Draft Genome Sequence of the Pyridinediol-Fermenting Bacterium Synergistes jonesii 78-1. Genome Announc. 2(4):e00833-14. doi: 10.1128/genomeA.00833-14. Manjula Gunawardana, Simon Chang, Abraham Jimenez, Daniel Holland-Moritz, Hannah Holland-Moritz. Bevans DR, Lang JM, Darling AE, Eisen JA, Coil DA. 2013. Draft genome sequence of. Sp strain UCD-THU (phylum. Leave a Reply Cancel reply. Create a free webs...

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seagrassmicrobiome.org

Hannah Holland-Moritz | The Seagrass Microbiome Project

https://seagrassmicrobiome.org/people/hannah-holland-moritz

The Seagrass Microbiome Project. A J4 Project (Jonathan, Jay, Jenna, Jessica). Welcome to the Seagrass Microbiome Project! ZEN2: Global biogeography of Zostera marina microbes. Bodega Bay: Side Projects for Summer Undergrads. Bodega Bay common garden experiments. Bodega Bay Field experiments. Bodega Bay pairwise competitions. Nutrient Uptake Experiments (with/without antibiotics). Sample Collection and Preservation. ZEN Microbial Sampling Kit Instructions. Email: hhollandmoritz AT gmail DOT com. Genome o...

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People - Fierer Lab

http://fiererlab.org/people

Exploring the structure and function of microbial communities. Research Foci: Soil microbes, microbial weathering, microbial genomics. 116;ess.brewer@colorado.edu. Research Foci: soil microbial ecology, high-throughput cultivation, microbial ecophysiology. Paul.carini@gmail.com. Research Focus: T.B.D. Mjchoudoir@gmail.com. Research Foci: Plant-Microbe Interactions. Jcorwin201@gmail.com. Research Focus: Soil microbial ecology, terrestrial ecosystem ecology. Research Foci: showerhead microbiome project.

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apipetteandanopenmind.wordpress.com

A Pipette and an Open Mind

A Pipette and an Open Mind. November 5, 2015. For anyone who’s been following the Seagrass Microbiome Project. At this point, you may be asking,. What exactly are these super-useful, super-cool Winogradsky column things? Sergei Winogradsky, one of the founders of microbial ecology possessed both a great brain and a great mustache. (Some people have it all). Photo credit: Wikimedia Commons). For all their usefulness, the columns are surprisingly simple. The general recipe to make one is:. Add some microbe...

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