archive.plants.ensembl.org
Ensembl PlantsEnsembl Plants is a genome-centric portal for plant species of scientific interest
http://archive.plants.ensembl.org/
Ensembl Plants is a genome-centric portal for plant species of scientific interest
http://archive.plants.ensembl.org/
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Ensembl Plants | archive.plants.ensembl.org Reviews
https://archive.plants.ensembl.org
Ensembl Plants is a genome-centric portal for plant species of scientific interest
archive.plants.ensembl.org
Hordeum vulgare - Ensembl Genomes
http://archive.plants.ensembl.org/Hordeum_vulgare/Info/Index
The barley genome assembly in Ensembl Plants is version 082214v1. This is a gene-space assembly of. Generated by the International Barley Genome Sequencing Consortium. With contigs ordered into chromosomal pseudomolecules using POPSEQ data from Ariyadasa et al. And Mascher et al. The gene models are provided by the PGSB. Group at the German Research Centre for Environmental Health. The data presented in Ensembl Plants has been organised as part of the U.K. Barley Genome Sequencing Project. EMBL-EBI Terms...
Zea mays - Ensembl Genomes
http://archive.plants.ensembl.org/Zea_mays/Info/Index
Data Source MaizeSequence.org. Maize) has the highest world-wide production of all grain crops, yielding 875 million tonnes in 2012 ( http:/ faostat.fao.org/. 2009) Maize is distinguished from other grasses in that its genome arose from an ancient tetraploidy event unique to its lineage. More information and statistics. More information and statistics. Convert your data to AGPv3 coordinates. Display your data in Ensembl Plants. What can I find? More about this genebuild. What can I find? What can I find?
Triticum aestivum - Ensembl Genomes
http://archive.plants.ensembl.org/Triticum_aestivum/Info/Index
Triticum aestivum (IWGSC1 popseq). Eg Traes 1BS 1172A6B03. The bread wheat genome in Ensembl Plants is the Chromosome Survey Sequence (CSS) for Triticum aestivum. Cv Chinese Spring, combined with the reference sequence of chromosome 3B, both generated by the International Wheat Genome Sequencing Consortium. The CSS assemblies have been further refined into chromosomal pseudomolecules using POPSEQ data generated by Chapman. The gene models for 3B were annotated by the GDEC group. More information and stat...
Ensembl Plants
http://archive.plants.ensembl.org/info/website
If you have a question that is not answered here, please Contact us. Looking for context-sensitive help? Button to get a pop-up help box containing a brief explanation of the page or image you're looking at. The following browsers are fully supported, i.e. all site features including JavaScript and CSS styles should work properly:. The following are not officially supported but should work with most or all of the site's current features:. Internet Explorer 6 and 7. EMBL-EBI Terms of use.
Ensembl Plants
http://archive.plants.ensembl.org/info/website/upload
Adding Custom Tracks to Ensembl. How to add custom tracks. How to add track hubs. Data access and security. How to add custom tracks. You can add a track from any species-specific page, such as Region in Detail. The track will automatically display in the view in which you have added it. You can also display an uploaded track in other views like Region Overview. And the whole Chromosome. To do so, click the Configure this page. Button at the left, and select the track within the Your data. Upload a file ...
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Triticum aestivum - Ensembl Genomes
http://plants.ensembl.org/Triticum_aestivum
Beta vulgaris subsp. vulgaris. Data Source TGAC Taxonomy ID 4565. Eg TRIAE CS42 7DL TGACv1 731555 AA2173560. Or TGACv1 scaffold 250239 3DL:42896-61821. This assembly and annotation is available for use under the terms of the Toronto Agreement. On prepublication data sharing. The previous wheat assembly ( IWGSC CSS. And every other plant from release 31 is available in the new Ensembl Plants archive. The A-genome donor) and an unknown grass thought to be related to. Which hybridized again with. Homologues...
Triticum aestivum - Ensembl Genomes
http://plants.ensembl.org/Triticum_aestivum/Info/Index
Beta vulgaris subsp. vulgaris. Data Source TGAC Taxonomy ID 4565. Eg TRIAE CS42 7DL TGACv1 731555 AA2173560. Or TGACv1 scaffold 250239 3DL:42896-61821. This assembly and annotation is available for use under the terms of the Toronto Agreement. On prepublication data sharing. The previous wheat assembly ( IWGSC CSS. And every other plant from release 31 is available in the new Ensembl Plants archive. The A-genome donor) and an unknown grass thought to be related to. Which hybridized again with. Homologues...
Ensembl Plants
http://plants.ensembl.org/info/website/help/index.html
Beta vulgaris subsp. vulgaris. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Oryza sativa Japonica (. Oryza sativa Japonica Group. Arabidopsis lyrata subsp. lyrata. Beta vulgaris subsp. vulgaris (. Beta vulgaris subsp. vulgaris. Brassica oleracea var. oleracea. Brassica rapa subsp. pekinensis. Cyanidioschyzon merolae strain 10D. Medicago truncatula str. A17. Musa acuminata subsp. malaccensis. Oryza sativa Indica (. Oryza sativa Indica Group. Select a species -.
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Search or Browse the Plant Ontology Database | Plant Ontology (PO)
Search or Browse the Plant Ontology Database. Example Searches: type 'endosperm' or 'PO:0009089' and select 'PO terms'. Type: 'CONSTANS' or 'AT5G15850' and select 'Annotations'. More options: Browse PO. Links to: Plant Anatomy Glossary;. About Plant Ontology (PO). Beginning in January 2011 (Version #14), the Plant Ontology was merged into a single ontology file (from two separate files) encompassing the following two aspects:. Examples of plant anatomical entities are plant structures ( PO:0009011. Plant...
Ensembl Plants
For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Oryza sativa Japonica (. Oryza sativa Japonica Group. Arabidopsis lyrata subsp. lyrata. Brassica oleracea var. oleracea. Brassica rapa subsp. pekinensis. Cyanidioschyzon merolae strain 10D. Medicago truncatula str. A17. Musa acuminata subsp. malaccensis. Oryza sativa Indica (. Oryza sativa Indica Group. Solanum lycopersicum str. Heinz 1706. Middot; Restore default list. Select a species -. What's New in Release 31.
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