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GENES.MIT.EDU

The Burge Laboratory web server. Services and sites on genes.mit.edu:. Burge Lab home page. Burge Lab Software Site. Burge Lab supplementary material to publications. Burge Lab web servers. ACEScan [ Genes ]. MaxEnt [ Build ]. Score splice sites ]. About genes.mit.edu:. Genesmit.edu is a Compaq Alpha ES40 server, with four Alpha processors and a lot of RAM. Despite the computing power, the server is often overworked.

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GENES.MIT.EDU | argonaute.mit.edu Reviews
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The Burge Laboratory web server. Services and sites on genes.mit.edu:. Burge Lab home page. Burge Lab Software Site. Burge Lab supplementary material to publications. Burge Lab web servers. ACEScan [ Genes ]. MaxEnt [ Build ]. Score splice sites ]. About genes.mit.edu:. Genesmit.edu is a Compaq Alpha ES40 server, with four Alpha processors and a lot of RAM. Despite the computing power, the server is often overworked.
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1 genesmit edu
2 genscan
3 genomescan
4 exonscan
5 mirscan
6 targetrank
7 targetscan
8 splicing motifs
9 rescue ese
10 fas ess
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GENES.MIT.EDU | argonaute.mit.edu Reviews

https://argonaute.mit.edu

The Burge Laboratory web server. Services and sites on genes.mit.edu:. Burge Lab home page. Burge Lab Software Site. Burge Lab supplementary material to publications. Burge Lab web servers. ACEScan [ Genes ]. MaxEnt [ Build ]. Score splice sites ]. About genes.mit.edu:. Genesmit.edu is a Compaq Alpha ES40 server, with four Alpha processors and a lot of RAM. Despite the computing power, the server is often overworked.

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Christopher Burge Lab

http://argonaute.mit.edu/burgelab

MASSACHUSETTS INSTITUTE OF TECHNOLOGY. Overview: Computational Biology of Gene Expression.

2

Index of /burgelab/Supplementary

http://argonaute.mit.edu/burgelab/Supplementary

Apache/2.2.14 (Fedora) Server at argonaute.mit.edu Port 80.

3

RESCUE-ESE Web Server

http://argonaute.mit.edu/burgelab/rescue-ese

An online tool for identifying candidate ESEs in vertebrate exons. Specific short oligonucleotide sequences that enhance pre-mRNA splicing when present in exons, termed exonic splicing enhancers (ESEs), play important roles in constitutive and alternative splicing ( ESE References. The RESCUE-ESE approach identified 238 hexamers as candidate ESEs. Using a large database of human genes of known exon-intron structure containing over 30,000 nonredudant exons. Enter Your Sequence (RNA or DNA) as plain text.

4

FAS-ESS web server

http://argonaute.mit.edu/fas-ess

Provided by the Burge Lab. You can enter a single sequence or multiple sequences in FASTA format. Non-letters will be removed from sequences. Lowercase letters will be converted to uppercase. T and U are considered the same. Wang, Z., Rolish, M. E., Yeo, G., Tung, V., Mawson, M. and Burge, C. B. (2004). Systematic identification and analysis of exonic splicing silencers. Cell. Please send feedback to Mike Rolish (merolish at mit dot edu).

5

Genome Annotation (GENOA) file Server

http://argonaute.mit.edu/genoa/index.html

This is the GENOA file server at MIT, providing access to genome alignments that detect loci and pertinent alternative transcript structures of genes in genomic sequences for the human genome. Related publications and online supplementary material. D Holste, C.B. Burge, et al. The making of mRNAs: computationally dissecting the alternative splicing of precursors by using the Hollywood database. In preparation. World-wide web Supplementary material. Genome Annotation (GENOA) pipeline. Aligns spliced cDNA ...

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Green Leaf - Sounds of Compassion: Family Ooh.. My Family

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GENES.MIT.EDU

The Burge Laboratory web server. Services and sites on genes.mit.edu:. Burge Lab home page. Burge Lab Software Site. Burge Lab supplementary material to publications. Burge Lab web servers. ACEScan [ Genes ]. MaxEnt [ Build ]. Score splice sites ]. About genes.mit.edu:. Genesmit.edu is a Compaq Alpha ES40 server, with four Alpha processors and a lot of RAM. Despite the computing power, the server is often overworked.

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