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arraymap.org

visualizing cancer genome array data @ arraymap.org

Visualizing cancer genome array data @ arraymap.org. Genomic copy number imbalances on chromosome 9 in a case of Glioblastoma ( GSM491153. Indcating, among others, a homozygous deletion involving CDKN2A/B. ArrayMap is a curated reference database and bioinformatics resource targeting copy number profiling data in human cancer. The arrayMap database provides an entry point for meta-analysis and systems level data integration of high-resolution oncogenomic CNA data. The current data reflects:. Baudis, M...

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visualizing cancer genome array data @ arraymap.org | arraymap.org Reviews
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Visualizing cancer genome array data @ arraymap.org. Genomic copy number imbalances on chromosome 9 in a case of Glioblastoma ( GSM491153. Indcating, among others, a homozygous deletion involving CDKN2A/B. ArrayMap is a curated reference database and bioinformatics resource targeting copy number profiling data in human cancer. The arrayMap database provides an entry point for meta-analysis and systems level data integration of high-resolution oncogenomic CNA data. The current data reflects:. Baudis, M&#4...
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visualizing cancer genome array data @ arraymap.org | arraymap.org Reviews

https://arraymap.org

Visualizing cancer genome array data @ arraymap.org. Genomic copy number imbalances on chromosome 9 in a case of Glioblastoma ( GSM491153. Indcating, among others, a homozygous deletion involving CDKN2A/B. ArrayMap is a curated reference database and bioinformatics resource targeting copy number profiling data in human cancer. The arrayMap database provides an entry point for meta-analysis and systems level data integration of high-resolution oncogenomic CNA data. The current data reflects:. Baudis, M&#4...

LINKS TO THIS WEBSITE

cnhl.progenetix.org cnhl.progenetix.org

ProgenetixCitation < ProgenetixGuide < Progenetixwiki

http://www.cnhl.progenetix.org/Wiki/ProgenetixGuide/ProgenetixCitation

25 Dec 2015, MichaelBaudis. For any use of theProgenetix data, e.g. as a reference for aberration frequencies in a certain locus, it is necessary to cite both the website and the original Bioinformatics publication:. Baudis, M., and Cleary, M. L. (2001). Progenetix.net: an online repository for molecular cytogenetic aberration data. Bioinformatics, 17(12), 1228-1229. Progenetix oncogenomic online resource: www.progenetix.org. Baudis, M. (2001-2014). And in the citations:. One 7(5), e36944. ArrayMap: Geno...

cnhl.progenetix.org cnhl.progenetix.org

WebHome < ProgenetixGuide < Progenetixwiki

http://www.cnhl.progenetix.org/Wiki/ProgenetixGuide

28 Jan 2017, MichaelBaudis. Usage guide for progenetix.org and arraymap.org. General Notes and Guide. Gene Lists and Coordinates. Mapping biosamples to ICD-O codes. Mapping biosamples to NCI neoplasms concepts. API for the arrayMap and Progenetix repositories. Programmatic access to the Progenetix. API access to ICD-O 3 codes. Api Examples: R Integration. How to cite the Progenetix. The implementation site for arrayMap data through the GA4GHschema. Is now a separate project.

imls.uzh.ch imls.uzh.ch

UZH -Institute of Molecular Life Sciences - Michael Baudis

http://www.imls.uzh.ch/baudis

Institute of Molecular Life Sciences. Institute of Molecular Life Sciences. Institute of Molecular Life Sciences. Prof Dr. Michael Baudis. Institute of Molecular Life Sciences. Swiss Institute of Bioinformatics. Phone: 41 44 635 34 86. Phone: 41 44 635 31 51. Fax (IMLS): 41 44 635 68 64. Bioinformatics / Theoretical Cytogenetics and Oncogenomics. An important aspect of my group's work is the curation of public cancer genome datasets. The Progenetix. As part of the DWG, the metadata task team is concerned...

dipg.progenetix.org dipg.progenetix.org

ProgenetixCitation < ProgenetixGuide < Progenetixwiki

http://www.dipg.progenetix.org/Wiki/ProgenetixGuide/ProgenetixCitation

25 Dec 2015, MichaelBaudis. For any use of theProgenetix data, e.g. as a reference for aberration frequencies in a certain locus, it is necessary to cite both the website and the original Bioinformatics publication:. Baudis, M., and Cleary, M. L. (2001). Progenetix.net: an online repository for molecular cytogenetic aberration data. Bioinformatics, 17(12), 1228-1229. Progenetix oncogenomic online resource: www.progenetix.org. Baudis, M. (2001-2014). And in the citations:. One 7(5), e36944. ArrayMap: Geno...

expasy.org expasy.org

ExPASy: SIB Bioinformatics Resource Portal - Categories

http://www.expasy.org/genomics

Query within a category:. Query a specific database:. Protein sequences and identification. Sequence sites, features and motifs. No support from the ExPASy Team). Bull; collection of eukaryotic promoters • [more]. Bull; Hierarchical catalog of eukaryotic orthologs • [more]. Bull; annotations of regulatory sites • [more]. Bull; SwissRegulon is a database of genome-wide annotations of regulatory sites. It contains annotations for 17 prokaryotes and 3 eukaryotes. The database frontend offers an intu...Bull;...

dipg.progenetix.org dipg.progenetix.org

WebHome < ProgenetixGuide < Progenetixwiki

http://www.dipg.progenetix.org/Wiki/ProgenetixGuide

28 Jan 2017, MichaelBaudis. Usage guide for progenetix.org and arraymap.org. General Notes and Guide. Gene Lists and Coordinates. Mapping biosamples to ICD-O codes. Mapping biosamples to NCI neoplasms concepts. API for the arrayMap and Progenetix repositories. Programmatic access to the Progenetix. API access to ICD-O 3 codes. Api Examples: R Integration. How to cite the Progenetix. The implementation site for arrayMap data through the GA4GHschema. Is now a separate project.

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visualizing cancer genome array data @ arraymap.org

External Links ↗. Visualizing cancer genome array data @ arraymap.org. Array probe level plots. Whole genome sequencing publications. Additional information / help. ArrayMap - genomic array data in cancer. Article PDF (registered users). Genomic copy number data in cancer: ICD-O 3 morphologies. Data at ArrayExpress / EMBL-EBI. Data at NCBI GEO. Subset specific data and / or visualizations. Progenetix - genomic copy number aberrations in cancer. Genomic copy number data in cancer: experimental series.

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visualizing cancer genome array data @ arraymap.org

Visualizing cancer genome array data @ arraymap.org. Genomic copy number imbalances on chromosome 9 in a case of Glioblastoma ( GSM491153. Indcating, among others, a homozygous deletion involving CDKN2A/B. ArrayMap is a curated reference database and bioinformatics resource targeting copy number profiling data in human cancer. The arrayMap database provides an entry point for meta-analysis and systems level data integration of high-resolution oncogenomic CNA data. The current data reflects:. Baudis, M&#4...

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