Department of Genetics, Albert Einstein College of Medicine. We study genetic variation in human populations, and use statistical models to learn about the evolutionary history of our species.
http://autonlab.einstein.yu.edu/
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the Auton lab | autonlab.einstein.yu.edu Reviews
https://autonlab.einstein.yu.edu
Department of Genetics, Albert Einstein College of Medicine. We study genetic variation in human populations, and use statistical models to learn about the evolutionary history of our species.
Auton Lab Blog: April 2012
http://autonlab.blogspot.com/2012_04_01_archive.html
Sunday, April 22, 2012. Welcome to the Auton Lab Blog! Nothing much to see here. yet. Subscribe to: Posts (Atom). Welcome to the Auton Lab Blog! Picture Window template. Powered by Blogger.
Auton Lab Blog: March 2014
http://autonlab.blogspot.com/2014_03_01_archive.html
Sunday, March 9, 2014. Stream ready version of VCFtools released! We're pleased to announce the release of VCFtools v0.1.12. This version can be downloaded from here: http:/ sourceforge.net/. Version v0.1.12 represents a fairly major revision, and includes a number of important changes and bug fixes. All users are encouraged to update as soon as possible. Importantly, this version includes support for working on standard input and output streams. Subscribe to: Posts (Atom).
Auton Lab Blog: Our paper: Escape from crossover interference increases with maternal age
http://autonlab.blogspot.com/2015/02/our-paper-escape-from-crossover.html
Thursday, February 19, 2015. Our paper: Escape from crossover interference increases with maternal age. Our latest paper has today been published in Nature Communications! You can read it here. The paper is about recombination, and describes how patterns of recombination differ between males and females, and how these patterns change with parental age. We have been studying recombination in a variety. However, up until now, nearly of all our studies have relied on using statistical. It has been an excell...
Auton Lab Blog: September 2012
http://autonlab.blogspot.com/2012_09_01_archive.html
Thursday, September 20, 2012. I didn't manage to post this before the event, but as way of keeping record, in the last lab meeting we read another one of the ENCODE papers. Http:/ genome.cshlp.org/content/22/9/1689.short. Wednesday, September 5, 2012. Lab meeting 12th Sept. We will read the new ENCODE paper:. Http:/ www.nature.com/nature/journal/v489/n7414/full/nature11247.html. Subscribe to: Posts (Atom). Lab meeting 12th Sept. Picture Window template. Powered by Blogger.
Auton Lab Blog: August 2012
http://autonlab.blogspot.com/2012_08_01_archive.html
Wednesday, August 29, 2012. Suppose you want to count the number of unique DNA motifs of a given length, while accounting for reverse complement. The number of unique DNA motifs of length L is given by:. If L is odd, and. 4 L) (4 (L / 2) / 2. If L is even. Just wanted to write that down :-). We're starting a regular lab meeting at 9am Wednesdays. For the first week, we will discuss the recent deCODE paper looking at de novo mutation rates:. Wednesday, August 15, 2012. The Auton Lab triples in size!
Auton Lab Blog: A late update
http://autonlab.blogspot.com/2012/09/a-late-update.html
Thursday, September 20, 2012. I didn't manage to post this before the event, but as way of keeping record, in the last lab meeting we read another one of the ENCODE papers. Http:/ genome.cshlp.org/content/22/9/1689.short. Lab meeting 12th Sept. Picture Window template. Powered by Blogger.
Auton Lab Blog: November 2012
http://autonlab.blogspot.com/2012_11_01_archive.html
Thursday, November 1, 2012. 1000 Genomes publishes Phase 1 Paper. Very pleased to see the 1000 Genomes paper in print. Http:/ www.nature.com/nature/journal/v491/n7422/full/nature11632.html. Congratulations to all involved. I wrote a brief blog post for a general audience about the implications of large scale projects such as the 1000 Genomes for the Einstein blog:. Http:/ blogs.einstein.yu.edu/? Thank you to Einstein's media team for making that happen! Subscribe to: Posts (Atom).
Auton Lab Blog: September 2013
http://autonlab.blogspot.com/2013_09_01_archive.html
Sunday, September 22, 2013. Experimental version of vcftools. In the past few weeks, we have been busily working on a new version of vcftools that supports working on streams. This should enable the use of vcftools within various pipelines without the need of writing to disk, and hopefully will be useful to a number of people. The new version can be obtained from a branch of the SVN:. Svn checkout svn:/ svn.code.sf.net/p/. Vcftools - vcf sample.vcf - freq - out sample output. Phased : Now this function o...
Auton Lab Blog: 1000 Genomes publishes Phase 1 Paper
http://autonlab.blogspot.com/2012/11/1000-genomes-publishes-phase-1-paper.html
Thursday, November 1, 2012. 1000 Genomes publishes Phase 1 Paper. Very pleased to see the 1000 Genomes paper in print. Http:/ www.nature.com/nature/journal/v491/n7422/full/nature11632.html. Congratulations to all involved. I wrote a brief blog post for a general audience about the implications of large scale projects such as the 1000 Genomes for the Einstein blog:. Http:/ blogs.einstein.yu.edu/? Thank you to Einstein's media team for making that happen! 1000 Genomes publishes Phase 1 Paper.
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Auton Lab Blog
Thursday, February 19, 2015. Our paper: Escape from crossover interference increases with maternal age. Our latest paper has today been published in Nature Communications! You can read it here. The paper is about recombination, and describes how patterns of recombination differ between males and females, and how these patterns change with parental age. We have been studying recombination in a variety. However, up until now, nearly of all our studies have relied on using statistical. It has been an excell...
The Auton Lab
The Auton Lab, part of Carnegie Mellon University. S School of Computer Science. Researches new approaches to Statistical Data Mining. It is directed by Artur Dubrawski. We are very interested in the underlying computer science, mathematics, statistics and AI of detection and exploitation of patterns in data. The Auton Lab is 21 years old in 2014! Congratulations and Thank You to all who helped make this possible!
the Auton lab
Department of Genetics, Albert Einstein College of Medicine. We study genetic variation in human populations, and use statistical models to learn about the evolutionary history of our species.
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