github.com
GitHub - biocaml/biocaml: OCaml Bioinformatics Library
https://github.com/biocaml/biocaml
Use Git or checkout with SVN using the web URL. Cannot retrieve the latest commit at this time. Failed to load latest commit information. The OCaml Bioinformatics Library. Biocaml aims to be a high-performance user-friendly library for Bioinformatics. See the website. For detailed API documentation. We welcome contributors and feedback from users. Please contact us with any comments and suggestions for features you would like added. Ashish Agarwal: agarwal1975@gmail.com. Website: http:/ biocaml.org.
open-bio.org
Projects - Open Bioinformatics Foundation
http://www.open-bio.org/wiki/Projects
From Open Bioinformatics Foundation. And their list of Global Sequence Identifiers. This website is out of date, a new one is being developed). The GMOD DB schema. An open-source library of JavaScript components to visualise biological data. Bioinformatics library in the functional programming language OCaml. Bioinformatics in a pure objects environment. Visual platform based on Eclipse. A tool to generate Web interfaces software for submitting jobs to these interfaces.
open-bio.org
Google Summer of Code - Open Bioinformatics Foundation
http://www.open-bio.org/wiki/Google_Summer_of_Code
Google Summer of Code. From Open Bioinformatics Foundation. Google Summer of Code (GSoC) is a student internship program for open-source projects. The program offers eligible student developers stipends to write code for open source projects over a period of 3 summer months ("flip bits, not burgers"). See the Google Summer of Code Main Site. For general information about the Google Summer of Code program, how to apply, frequently asked general questions, and more. OBF Projects Accepting Applicants. Devel...
ashishagarwal.org
Software | Ashish Agarwal
http://ashishagarwal.org/software
Library for bioinformatics. It is meant to be the OCaml analog to BioPerl, BioPython, etc. This library was originally used for the modENCODE Project at Yale, and has since been used on a variety of other projects at NYU and elsewhere. The API is well documented and many additional features are planned. At NYU, I managed and co-authored (with Sebastien Mondet) several software projects. Two code bases are in production use: hitscore. Our code on Mechanizing Mathematics. We then switched over to. For anal...