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Bioinformatics Laboratory | CRS4 Bioinformatics Laboratory

In the above context, our research is directed towards the development of new computational models. For the management and integration of high-throughput datasets. Our research activities are tightly integrated with an advanced genomics facility platform providing cutting-edge technologies for high-throughput analysis and next generation. Genomic approaches and are supported by the CRS4 leading High Performance Computing. PARIGA, the server for all-against-all BLAST searches published in PlosONE.

http://bioinformatica.crs4.it/

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Bioinformatics Laboratory | CRS4 Bioinformatics Laboratory | bioinformatica.crs4.it Reviews
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In the above context, our research is directed towards the development of new computational models. For the management and integration of high-throughput datasets. Our research activities are tightly integrated with an advanced genomics facility platform providing cutting-edge technologies for high-throughput analysis and next generation. Genomic approaches and are supported by the CRS4 leading High Performance Computing. PARIGA, the server for all-against-all BLAST searches published in PlosONE.
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2 contacts
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Bioinformatics Laboratory | CRS4 Bioinformatics Laboratory | bioinformatica.crs4.it Reviews

https://bioinformatica.crs4.it

In the above context, our research is directed towards the development of new computational models. For the management and integration of high-throughput datasets. Our research activities are tightly integrated with an advanced genomics facility platform providing cutting-edge technologies for high-throughput analysis and next generation. Genomic approaches and are supported by the CRS4 leading High Performance Computing. PARIGA, the server for all-against-all BLAST searches published in PlosONE.

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maistas.bioinformatica.crs4.it maistas.bioinformatica.crs4.it

MAÌSTAS - Modeling and Assessment of Isoforms Through Automated Server

Retrieve results by job identifier or by email:. Select the organism or the special FASTA format input. Homo sapiens genes (GRCh37). Anolis carolinensis genes (AnoCar1.0). Bos taurus genes (Btau 4.0). Caenorhabditis elegans genes (WS210). Callithrix jacchus genes (calJac3). Canis familiaris genes (CanFam 2.0). Cavia porcellus genes (cavPor3). Choloepus hoffmanni genes (choHof1). Ciona intestinalis genes (JGI2). Ciona savignyi genes (CSAV2.0). Danio rerio genes (Zv8). Dasypus novemcinctus genes (dasNov2).

splicing.bioinformatica.crs4.it splicing.bioinformatica.crs4.it

SpliVaP Database of Splice-mediated changes in Variant Proteins

SpliVaP : Database of Splice-mediated changes in Variant Proteins. It is often the case that mammalian genes are alternatively spliced; most of the resulting alternate transcript patterns are translated in the cell as isoform protein sequences. We have developed a computational pipeline that characterizes such isoform protein sequences for functional differences. Individual isoform sequences are annotated for presence of signatures such as domains and fingerprints. The pipeline then delineate...

detector.bioinformatica.crs4.it detector.bioinformatica.crs4.it

CRS4 Bioinformatica Detector Application

DeTECTOR: Detection Tool of Elements Controlling Translation of Open Reading frame. Detection tool of Elements controlling Translation of Open Reading frame) is a diagnostic tool which return the propensity of a given mRNA to be translated into peptide. It based on three simple neural networks that classify transcripts into three classes: coding, pseudogenes and generic untranslated RNAs. Submit your cdna sequence.

resources.bioinformatica.crs4.it resources.bioinformatica.crs4.it

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bioinformatica.crs4.it bioinformatica.crs4.it
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Publications | CRS4 Bioinformatics Laboratory

http://www.bioinformatica.crs4.it/publications

Bioinformatics - POLARIS Science and Technology Park - 09010 Pula (CA), Italy CRS4 2013. Registration is now open for 5th edition of the Hands-on Workshop on NGS data analysis using Galaxy. Registration is now open for 4th edition of the Hands-on Workshop on NGS data analysis using Galaxy. Registration is now open for 3rd edition of the Hands-on Workshop on NGS data analysis using Galaxy. Registration is now open for the 2nd edition of the Hands-on Workshop on NGS data analysis using Galaxy.

2

PARIGA, the server for all-against-all BLAST searches published in PlosONE | CRS4 Bioinformatics Laboratory

http://www.bioinformatica.crs4.it/node/730

PARIGA, the server for all-against-all BLAST searches published in PlosONE. Wed, 05/15/2013 - 12:01 Paolo Uva. Massimiliano Orsini, Gianmauro Cuccuru and Paolo Uva, researchers at CRS4 Bioinformatics Laboratory, published a server for all-against-all blast searches. The Pariga web server is designed to be a helpful tool for managing the results of sequence similarity searches. The design and implementation of the server renders all operations very fast and easy to use. PARIGA, the server for all-against-...

3

Bioinformatics Laboratory

http://www.bioinformatica.crs4.it/print/1

Http:/ www.bioinformatica.crs4.it. In the above context, our research is directed towards the development of new computational models. For the management and integration of high-throughput datasets. Our research activities are tightly integrated with an advanced genomics facility platform providing cutting-edge technologies for high-throughput analysis and next generation. Genomic approaches and are supported by the CRS4 leading High Performance Computing.

4

Training | CRS4 Bioinformatics Laboratory

http://www.bioinformatica.crs4.it/training

Lo sviluppo recente di tecnologie sperimentali ad alta processività (Next Generation Sequencing - NGS) ha reso disponibili alla comunità scientifica una enorme quantità di dati di interesse biomedico. I corsi sono rivolti a medici, biologi, tecnici e ricercatori delle Scienze della Vita che lavorano o sono interessati a lavorare con elevati volumi di dati di sequenziamento di prossima generazione. Ad oggi, 100 ricercatori provenienti da diverse istituzioni hanno seguito i corsi di formazione del CRS4, ac...

5

Registration is now open for the 2nd edition of the Hands-on Workshop on NGS data analysis using Galaxy | CRS4 Bioinformatics Laboratory

http://www.bioinformatica.crs4.it/node/735

Registration is now open for the 2nd edition of the Hands-on Workshop on NGS data analysis using Galaxy. Fri, 07/26/2013 - 20:13 Paolo Uva. Registration is now open for the 2nd edition of the Hands-on Workshop on Analysis of Next Generation Sequencing data using Galaxy. The course wil be held at CRS4, Polaris Science and Technology Park, Pula (CA), Italy, October 8-11 2013. NGS Hands-on Workshop October 2013. Bioinformatics - POLARIS Science and Technology Park - 09010 Pula (CA), Italy CRS4 2013.

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detector.bioinformatica.crs4.it detector.bioinformatica.crs4.it

CRS4 Bioinformatica Detector Application

http://detector.bioinformatica.crs4.it/cdna

DeTECTOR: Detection Tool of Elements Controlling Translation of Open Reading frame. Paste your cDNA sequence(s):. Please enter the 5 letters displayed below:.

detector.bioinformatica.crs4.it detector.bioinformatica.crs4.it

CRS4 Bioinformatica Detector Application

http://detector.bioinformatica.crs4.it/aim

DeTECTOR: Detection Tool of Elements Controlling Translation of Open Reading frame.

detector.bioinformatica.crs4.it detector.bioinformatica.crs4.it

CRS4 Bioinformatica Detector Application

http://detector.bioinformatica.crs4.it/formats

DeTECTOR: Detection Tool of Elements Controlling Translation of Open Reading frame. Detector accepts sequence(s) in (multi)fasta format. Formatting characters (":", ";", ",", " ", etc) are not allowed in the sequence header.

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Deze website is een portaal voor de bioinformatica studenten aan Howest. En bevat het cursusmateriaal van het vak structurele bioinformatica. Daarnaast vind je er lijsten van veel gebruikte databanken en handige tools. De introductie tot EndNote en ReadCube die deel uitmaakt van de inleiding tot de masterproef aan UGent vind je hier.

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Bioinformatics Laboratory | CRS4 Bioinformatics Laboratory

In the above context, our research is directed towards the development of new computational models. For the management and integration of high-throughput datasets. Our research activities are tightly integrated with an advanced genomics facility platform providing cutting-edge technologies for high-throughput analysis and next generation. Genomic approaches and are supported by the CRS4 leading High Performance Computing. PARIGA, the server for all-against-all BLAST searches published in PlosONE.

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Departamentul de Bioinformatica al Institutului National de Cercetare-Dezvoltare pentru Stiinte Biologice. Urmareste crearea unei perspective globale in care biologia si informatica se contopesc intr-o singura disciplina. Membrii departamentului sunt matematicieni, bioinformaticieni si biofizicieni, toti lucrand in stransa colaborare cu biologi si biochimisti din celelalte departamente ale institutului.

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Skip to main content. O Mestrado em Bioinformática resulta da necessidade de formação multidisciplinar sentida na intersecção das áreas biomédicas com as tecnologias da informação. Este é um curso de 2º ciclo com um total de 120 ECTS e a duração de 4 semestres lectivos, estando aberto a candidatos que tenham completado o 1º ciclo quer nas áreas biomédicas, quer nas áreas da informática e tecnologias de informação. Em 2012/2013 o curso entrará já na sua 6ª edição! Os alunos que completem este mestrado dev...

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DNALinux is a Live Linux for bioinformatic use. Just boot your computer and have several bioinformatic software. Download and use it free. International Workshops on Bioinformatics 2012. 5th International Biocuration Conference. Online Linux course for biologists. SciPy India 2011 Abstracts due November 2nd. New articles this week in PLoS ONE. New articles in PLoS Computational Biology, April 10 2009. Python for Bioinformatics book. Biomarker World Congress 2009. Welcome to the Frontpage. DISI Dept. ...

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INTA Bioinformatics Unit

The INTA Bioinformatics Unit belongs to the Biotechnology Institute in CICVyA (INTA Castelar). This unit works in diferent fields such as: Analize data from Next Generation Sequencing, Assembly, Structural and Funtional annotation, Variant detection, Database and graphical user interfaces development, Differential expression experiments (RNA-Seq and Microarrays).