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Fungal Bioinformatics and Genetics Research |

This site hosts information about fungal bioinformatics, genomics and molecular biology research by Michael Thon and Serenella Sukno. We work in the Genetics

http://bioinformatica.vil.usal.es/

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Fungal Bioinformatics and Genetics Research | | bioinformatica.vil.usal.es Reviews
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This site hosts information about fungal bioinformatics, genomics and molecular biology research by Michael Thon and Serenella Sukno. We work in the Genetics
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1 Bioinformatics
2 Fungal Genomics
3 Fungal Genetics
4 gene functional annotation
5 gene family evolution
6 genome organization
7 synteny
8 fungal genomics
9 colletotrichum graminicola
10 maize anthracnose
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skip to content,publications,teaching,protocols,people,research,search for,news,congratulations víctor bello,press,recent publications,tutorials
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Fungal Bioinformatics and Genetics Research | | bioinformatica.vil.usal.es Reviews

https://bioinformatica.vil.usal.es

This site hosts information about fungal bioinformatics, genomics and molecular biology research by Michael Thon and Serenella Sukno. We work in the Genetics

INTERNAL PAGES

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1

DiCYT – A gene helping fungi to attack plants | Fungal Bioinformatics and Genetics Research

http://bioinformatica.vil.usal.es/a-gene-helping-fungi-to-attack-plants

Fungal Bioinformatics and Genetics Research. Software & Databases. Science Daily – Differences in the Genomes of Related Plant Pathogens. Postdoctoral offer at the University of Salamanca, Spain →. DiCYT – A gene helping fungi to attack plants. November 26, 2013. A gene helping fungi to attack plants. This entry was posted in Press. Science Daily – Differences in the Genomes of Related Plant Pathogens. Postdoctoral offer at the University of Salamanca, Spain →. Fungal Bioinformatics and Genetics Research.

2

Identificado un gen que ayuda a un género de hongos a atacar a las plantas – Local – Salamanca24horas.com – Periódico líder digital de Salamanca | Fungal Bioinformatics and Genetics Research

http://bioinformatica.vil.usal.es/identificado-un-gen-que-ayuda-a-un-genero-de-hongos-a-atacar-a-las-plantas-local-salamanca24horas-com-periodico-lider-digital-de-salamanca

Fungal Bioinformatics and Genetics Research. Software & Databases. First report of apple bitter rot caused by Colletotrichum godetiae in the UK. Draft Genome Sequence of Colletotrichum acutatum Sensu Lato (Colletotrichum fioriniae) →. Identificado un gen que ayuda a un género de hongos a atacar a las plantas – Local – Salamanca24horas.com – Periódico líder digital de Salamanca. March 11, 2014. This entry was posted in Press. First report of apple bitter rot caused by Colletotrichum godetiae in the UK.

3

Recent Publications | Fungal Bioinformatics and Genetics Research

http://bioinformatica.vil.usal.es/category/recent-publications

Fungal Bioinformatics and Genetics Research. Software & Databases. Category Archives: Recent Publications. A highly conserved metalloprotease effector enhances virulence in the maize anthracnose fungus Colletotrichum graminicola. December 7, 2015. Comments Off on A highly conserved metalloprotease effector enhances virulence in the maize anthracnose fungus Colletotrichum graminicola. A fungal effector with host nuclear localization and DNA-binding properties is required for maize anthracnose development.

4

Science Daily – Differences in the Genomes of Related Plant Pathogens | Fungal Bioinformatics and Genetics Research

http://bioinformatica.vil.usal.es/science-daily-differences-in-the-genomes-of-related-plant-pathogens

Fungal Bioinformatics and Genetics Research. Software & Databases. Congratulations Manuel on his Beca de Colaboración! DiCYT – A gene helping fungi to attack plants →. Science Daily – Differences in the Genomes of Related Plant Pathogens. November 26, 2013. Http:/ www.sciencedaily.com/releases/2012/08/120812151712.htm. This entry was posted in Press. Congratulations Manuel on his Beca de Colaboración! DiCYT – A gene helping fungi to attack plants →. Fungal Bioinformatics and Genetics Research.

5

Publications | Fungal Bioinformatics and Genetics Research

http://bioinformatica.vil.usal.es/publications-2

Fungal Bioinformatics and Genetics Research. Software & Databases. See our list of manuscripts in preparation. Niño-Sánchez, J., Casado-del Castillo, V .,Tello, V., Vega-Bartol, J., Ramos, B., Sukno S.A. and Díaz-Mínguez J.M. 2016. The FTF gene family regulates virulence and expression of SIX effectors in. Molecular Plant Pathology (in press). Molecular Plant Pathology (2015). doi:10.1111/mpp.12347. By highly virulent and weakly virulent strains of Fusarium oxysporum. Armijos-Jaramillo, V.D., Suk...Rech,...

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RunIprScan | Michael R. Thon

http://michaelrthon.com/runiprscan

Michael R. Thon. RunIprScan is a command line utility for scanning protein sequences with InterProScan. You don’t need to install InterProScan to use it. The protein sequences are sent to the European Bioinformatics Institute’s web service where they are processed on the EBI’s compute cluster, returning the scan results in xml format and in a tab delimited table suitable for importing into a spreadsheet. Download now: RunIprScan-1.1.0. 100 Nov. 2, 2011. Initial release. Blog posts by category.

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February | 2014 | Michael R. Thon

http://michaelrthon.com/2014/02

Michael R. Thon. Monthly Archives: February 2014. Geneious plugin sources are now on Bitbucket. I just released my source code for two Geneious plugins, InterProScan. This entry was posted in Uncategorized. February 8, 2014. Http:/ bioinformatica.vil.usal.es. Blog posts by category. Proudly powered by WordPress.

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InterProScan Plugin for Geneious | Michael R. Thon

http://michaelrthon.com/geneious-interproscan-plugin

Michael R. Thon. InterProScan Plugin for Geneious. The Geneious InterProScan Plugin enables you to run InterProScan from within the Geneious application. First, a few definitions. InterPro. Is a database of protein families and domains that was developed by the European Bioinformatics Institute. InterPro integrates many of the most popular protein family and domain databases such as PFAM and PRODOM together into one federated database. InterProScan. This plugin submits protein sequences to the InterProSc...

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May | 2013 | Michael R. Thon

http://michaelrthon.com/2013/05

Michael R. Thon. Monthly Archives: May 2013. Reproducibility: Six red flags for suspect work : Nature : Nature Publishing Group. May 27, 2013. Simplify Your Life With an SSH Config File : Nerderati. May 1, 2013. Http:/ bioinformatica.vil.usal.es. Blog posts by category. Proudly powered by WordPress.

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App Development | Michael R. Thon

http://michaelrthon.com/category/app-development

Michael R. Thon. Category Archives: App Development. Simplify Your Life With an SSH Config File : Nerderati. May 1, 2013. Average App Store Review Times. Unfortunately it looks like Mac App Store review times are going up again…. Average App Store Review Times. This entry was posted in App Development. April 1, 2013. Http:/ bioinformatica.vil.usal.es. Blog posts by category. Proudly powered by WordPress.

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June | 2013 | Michael R. Thon

http://michaelrthon.com/2013/06

Michael R. Thon. Monthly Archives: June 2013. Declining Fruit and Vegetable Nutrient Composition: What Is the Evidence? June 17, 2013. Spray, Poison, Eat: Glyphosate (Roundup) In Our Food By Colin Todhunter. June 16, 2013. Http:/ bioinformatica.vil.usal.es. Blog posts by category. Proudly powered by WordPress.

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December | 2012 | Michael R. Thon

http://michaelrthon.com/2012/12

Michael R. Thon. Monthly Archives: December 2012. Developing Geneious plugins with NetBeans. This guide assumes that you are already somewhat familiar with NetBeans and the Apache ant build tool. Start NetBeans. From the new project window select Java Free-Form Project. Build And Run Options: The next screen lets you map buttons in the NetBeans toolbar to targets in the build.xml file. the build and clean buttons should already be mapped. We’ll set up the other buttons later. Click Next. Project Output: ...

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Augustus Plugin for Geneious | Michael R. Thon

http://michaelrthon.com/augustus-plugin-for-geneious

Michael R. Thon. Augustus Plugin for Geneious. The Augustus plugin for Geneious lets you run Augustus. An ab initio gene prediction program for eukaryotic DNA sequences. This plugin is in an early stage of development but the basic functionality is there: you can select a species from a list of pre-trained species and obtain a set of gene annotations for your genomic DNA sequences. You can follow the development on Bitbucket. 3 thoughts on “ Augustus Plugin for Geneious. August 11, 2014 at 11:14 pm.

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March | 2013 | Michael R. Thon

http://michaelrthon.com/2013/03

Michael R. Thon. Monthly Archives: March 2013. I had no idea this still exists…. Manton Reece just posted a comment. Here’s the original article: Macworld – Hotline Revisited. This entry was posted in Mac. March 31, 2013. Http:/ bioinformatica.vil.usal.es. Blog posts by category. Proudly powered by WordPress.

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April | 2013 | Michael R. Thon

http://michaelrthon.com/2013/04

Michael R. Thon. Monthly Archives: April 2013. Is it me or does this sound like a really, really bad idea? US Lawmaker Proposes New Criteria for Choosing NSF Grants – ScienceInsider. April 30, 2013. Average App Store Review Times. Unfortunately it looks like Mac App Store review times are going up again…. Average App Store Review Times. This entry was posted in App Development. April 1, 2013. Http:/ bioinformatica.vil.usal.es. Blog posts by category. Proudly powered by WordPress.

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