bioinformatics.bio.uu.nl

Theoretical Biology & Bioinformatics | Utrecht University

Theoretical Biology and Bioinformatics. Minor biology for math/physics students. Useful links and documents. The group consists of a Theoretical Biology unit (headed by Rob de Boer) and a Bioinformatics unit (headed by Berend Snel), and is composed of several PI groups (labs) that each have their own biological focus of interest (see our page on Research. We house our own high performance cluster of multi-core Linux workstations to perform large scale simulations and bioinformatic analyses.

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Theoretical Biology & Bioinformatics | Utrecht University | bioinformatics.bio.uu.nl Reviews

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Theoretical Biology and Bioinformatics. Minor biology for math/physics students. Useful links and documents. The group consists of a Theoretical Biology unit (headed by Rob de Boer) and a Bioinformatics unit (headed by Berend Snel), and is composed of several PI groups (labs) that each have their own biological focus of interest (see our page on Research. We house our own high performance cluster of multi-core Linux workstations to perform large scale simulations and bioinformatic analyses.

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1 about us

2 members

3 publications

4 positions available

5 agenda

6 education

7 bachelor program

8 master track

9 phd program

10 honours program qbio

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about us,members,publications,positions available,agenda,education,bachelor program,master track,phd program,honours program qbio,advanced courses,research,rob de boer,berend snel,paulien hogeweg,can kesmir,kirsten ten tusscher,rutger hermsen,bas dutilh

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Theoretical Biology & Bioinformatics | Utrecht University | bioinformatics.bio.uu.nl Reviews

https://bioinformatics.bio.uu.nl

Theoretical Biology and Bioinformatics. Minor biology for math/physics students. Useful links and documents. The group consists of a Theoretical Biology unit (headed by Rob de Boer) and a Bioinformatics unit (headed by Berend Snel), and is composed of several PI groups (labs) that each have their own biological focus of interest (see our page on Research. We house our own high performance cluster of multi-core Linux workstations to perform large scale simulations and bioinformatic analyses.

INTERNAL PAGES

bioinformatics.bio.uu.nl

1

Theoretical Biology & Bioinformatics | Utrecht University

http://bioinformatics.bio.uu.nl/advanced.html

Theoretical Biology and Bioinformatics. Minor biology for math/physics students. Useful links and documents. Minor biology for math/physics students (in Dutch). Useful links and documents. Contact: Dr. Can Kesmir. Advanced MSc and PhD courses. We give (and participate in) in a number of specialized courses for master and PhD students on topics associated with one of the research lines of the group. Some of the courses are given every year, others alternate over the years. Check the group agenda. Immunolo...

2

Theoretical Biology & Bioinformatics | Utrecht University

http://bioinformatics.bio.uu.nl/master.html

Theoretical Biology and Bioinformatics. Minor biology for math/physics students. Useful links and documents. Minor biology for math/physics students (in Dutch). Useful links and documents. Contact: Dr. Can Kesmir. Excellent students in the track Computational Biology are advised to follow the QBio honours. Programme with a special focus on quantitative biology. Simulate multi-scale computational models to study complex developmental pattern formation processes and their evolution. Bacterial cells can cha...

3

Theoretical Biology & Bioinformatics | Utrecht University

http://bioinformatics.bio.uu.nl/education.html

Theoretical Biology and Bioinformatics. Minor biology for math/physics students. Useful links and documents. Minor biology for math/physics students (in Dutch). Useful links and documents. Contact: Dr. Can Kesmir. Sequence analysis, phylogeny, and genomics. Analysis of biological high throughput data. Agent based computer simulation models.

4

Theoretical Biology & Bioinformatics | Utrecht University

http://bioinformatics.bio.uu.nl/people.html

Theoretical Biology and Bioinformatics. Minor biology for math/physics students. Useful links and documents. Group leader - working on Theoretical Immunology. Honorary professor - working on Bioinformatics. Staff member - working on Bioinformatics. Staff member - working on Immunological bioinformatics. Staff member - working on Computational Evolutionary Biology. Staff member - working on Immunogenetics. Staff member - working on Evolution in Heterogeneous Environments and Bacterial Growth. Working on C...

5

Utrecht University | Theoretical Biology & Bioinformatics

http://bioinformatics.bio.uu.nl/kesmir/index.html

Theoretical Biology and Bioinformatics. Minor biology for math/physics students. Vertebrate cells sample short peptides from endogenous proteins, and present them to the immune system via MHC class I molecules on the cell surface. T-cells scan the presented peptides and need to discriminate foreign (nonself) peptides from host (self) peptides. We develop bioinformatics methods that can be used to identify antigenic regions in basically any genome; these methods explained more in detail in Research.

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tbb.bio.uu.nl

Ten Tusscher Lab, Computational Developmental and Evolutionary Biology

http://tbb.bio.uu.nl/khwjtuss/ttgroup.html

Theoretical Biology and Bioinformatics. Computational Developmental and Evolutionary Biology. Theoretical Biology and Bioinformatics. Computational Developmental and Evolutionary Biology. A nice example of our approach is our recent work on plant development ( Mahonen et al., Nature, 2014. The Computational Developmental and Evolutionary Biology Group is part of Theoreotical Biology and Bioinformatics. Assistant professor, Principal Investigator. Former Members / Students. Redmar van den Berg, Master stu...

tbb.bio.uu.nl

Prof. dr. Paulien Hogeweg, Theoretical Biology/Bioinformatics Utrecht

http://tbb.bio.uu.nl/ph/index.html

Prof dr. Paulien Hogeweg. Phone: 31 30 2533692. Fax: 31 30 2513655. Email: user: P.Hogeweg domain: uu.nl. The aim of my research is to understand biotic systems as dynamic information processing systems at many interconnected levels. In the seventies we identified the study of informatic processes in biotic systems as an open and promising research area for which we coined the term. Within this framework my current research focuses on evolutionary dynamics and morhogenesis. Our research on multilevel evo...

www-binf.bio.uu.nl

Ten Tusscher Lab, Computational Developmental and Evolutionary Biology

http://www-binf.bio.uu.nl/khwjtuss/ttgroup.html

Theoretical Biology and Bioinformatics. Computational Developmental and Evolutionary Biology. Theoretical Biology and Bioinformatics. Computational Developmental and Evolutionary Biology. A nice example of our approach is our recent work on plant development ( Mahonen et al., Nature, 2014. The Computational Developmental and Evolutionary Biology Group is part of Theoreotical Biology and Bioinformatics. Assistant professor, Principal Investigator. Former Members / Students. Redmar van den Berg, Master stu...

theory.bio.uu.nl

Prof. dr. Paulien Hogeweg, Theoretical Biology/Bioinformatics Utrecht

http://theory.bio.uu.nl/ph/index.html

Prof dr. Paulien Hogeweg. Phone: 31 30 2533692. Fax: 31 30 2513655. Email: user: P.Hogeweg domain: uu.nl. The aim of my research is to understand biotic systems as dynamic information processing systems at many interconnected levels. In the seventies we identified the study of informatic processes in biotic systems as an open and promising research area for which we coined the term. Within this framework my current research focuses on evolutionary dynamics and morhogenesis. Our research on multilevel evo...

theory.bio.uu.nl

Snel Lab, Evolutionary Genomics and Integrative Bioinformatics

http://theory.bio.uu.nl/snel/group.html

Theoretical Biology and Bioinformatics. Evolutionary Genomics and Integrative Bioinformatics. Theoretical Biology and Bioinformatics. Evolutionary Genomics and Integrative Bioinformatics. The Evolutionary Genomics and Integrative Bioinformatics Group is part of Theoreotical Biology and Bioinformatics. Professor, Principal Investigator. Eelco Tromer, PhD student. Leny Van Wijk, PhD student. Jolien van Hooff, PhD student. Ethel Gilliquet, Master student. Former Members / Students. Michael F. Seidl. Fate of...

www-binf.bio.uu.nl

Snel Lab, Evolutionary Genomics and Integrative Bioinformatics

http://www-binf.bio.uu.nl/snel/group.html

Theoretical Biology and Bioinformatics. Evolutionary Genomics and Integrative Bioinformatics. Theoretical Biology and Bioinformatics. Evolutionary Genomics and Integrative Bioinformatics. The Evolutionary Genomics and Integrative Bioinformatics Group is part of Theoreotical Biology and Bioinformatics. Professor, Principal Investigator. Eelco Tromer, PhD student. Leny Van Wijk, PhD student. Jolien van Hooff, PhD student. Ethel Gilliquet, Master student. Former Members / Students. Michael F. Seidl. Fate of...

tbb.bio.uu.nl

Snel Lab, Evolutionary Genomics and Integrative Bioinformatics

http://tbb.bio.uu.nl/snel/group.html

Theoretical Biology and Bioinformatics. Evolutionary Genomics and Integrative Bioinformatics. Theoretical Biology and Bioinformatics. Evolutionary Genomics and Integrative Bioinformatics. The Evolutionary Genomics and Integrative Bioinformatics Group is part of Theoreotical Biology and Bioinformatics. Professor, Principal Investigator. Eelco Tromer, PhD student. Leny Van Wijk, PhD student. Jolien van Hooff, PhD student. Ethel Gilliquet, Master student. Former Members / Students. Michael F. Seidl. Fate of...

www-binf.bio.uu.nl

Prof. dr. Paulien Hogeweg, Theoretical Biology/Bioinformatics Utrecht

http://www-binf.bio.uu.nl/ph/index.html

Prof dr. Paulien Hogeweg. Phone: 31 30 2533692. Fax: 31 30 2513655. Email: user: P.Hogeweg domain: uu.nl. The aim of my research is to understand biotic systems as dynamic information processing systems at many interconnected levels. In the seventies we identified the study of informatic processes in biotic systems as an open and promising research area for which we coined the term. Within this framework my current research focuses on evolutionary dynamics and morhogenesis. Our research on multilevel evo...

theory.bio.uu.nl

Ten Tusscher Lab, Computational Developmental and Evolutionary Biology

http://theory.bio.uu.nl/khwjtuss/ttgroup.html

Theoretical Biology and Bioinformatics. Computational Developmental and Evolutionary Biology. Theoretical Biology and Bioinformatics. Computational Developmental and Evolutionary Biology. A nice example of our approach is our recent work on plant development ( Mahonen et al., Nature, 2014. The Computational Developmental and Evolutionary Biology Group is part of Theoreotical Biology and Bioinformatics. Assistant professor, Principal Investigator. Former Members / Students. Redmar van den Berg, Master stu...

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Training Program in Bioinformatics For Health Research

A poster advertising this program. NEW NSERC-CREATE FUNDING ANNOUNCED:. Training Program in High-Dimensional Bioinformatics (HDB). 1,650,000 (over six years). CIHR Funding has ended. The CIHR Training Scholarships will no longer be available. The Bioinformatics graduate programs at UBC bioinformatics.ubc.ca. And SFU bioinformatics.sfu.ca. Until then, please see the links below for other bioinformatics opportunites in British Columbia:. Bioinformatics Training Program for Health Research. If you are not a...

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Wim Van Criekinge @ University of Ghent. Skip to primary content. Skip to secondary content. A user’s guide to the human genome. How Perl Saved the Human Genome Project. DYI Bio @ Timelab. April 27, 2015. The future is now. March 14, 2015. December 8, 2014. From GO 2 HMM. December 1, 2014. November 28, 2014. November 25, 2014. Bioinformatics 7: Protein Structure & Master Thesis @ Biobix. November 24, 2014. November 24, 2014. November 4, 2014. November 4, 2014. Bioinformatics I and II.

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Computational Genomics Research Group. University of California, Berkeley. PI: Steven E. Brenner. Paper published: Tavtigian SV, Greenblatt MS, Harrison SM, Nussbaum RL, Prabhu SA, Boucher KM, Biesecker LG, on behalf of the ClinGen Sequence Variant Interpretation Task Team (ClinGen SVI). Modeling the ACMG/AMP Variant Classification Guidelines as a Bayesian Classification Framework. Doi:10.1038/gim.2017.210. 39(3):454-458. PMID:29282786. PMCID:5805595 doi:10.1002/humu.23393. Was published, including the f...

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bioinformatics.bio.uu.nl

Theoretical Biology & Bioinformatics | Utrecht University

Theoretical Biology and Bioinformatics. Minor biology for math/physics students. Useful links and documents. The group consists of a Theoretical Biology unit (headed by Rob de Boer) and a Bioinformatics unit (headed by Berend Snel), and is composed of several PI groups (labs) that each have their own biological focus of interest (see our page on Research. We house our own high performance cluster of multi-core Linux workstations to perform large scale simulations and bioinformatic analyses.

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