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bioKepler | Bioinformatics Scientific Workflow Module

Skip to main content. A Comprehensive Bioinformatics Scientific Workflow Module for Distributed Analysis of Large-Scale Biological Data. BioKepler is a module that is distributed on top of the core Kepler scientific workflow system. Please refer to the Kepler collaboration website. For more information on Kepler in general. To cite bioKepler, please use the following reference:. In: Proceedings of the Workshop on Data analytics in the Cloud at EDBT/ICDT 2012 Conference, DanaC2012, 2012, pp 73-78.

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bioKepler | Bioinformatics Scientific Workflow Module | biokepler.org Reviews

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Skip to main content. A Comprehensive Bioinformatics Scientific Workflow Module for Distributed Analysis of Large-Scale Biological Data. BioKepler is a module that is distributed on top of the core Kepler scientific workflow system. Please refer to the Kepler collaboration website. For more information on Kepler in general. To cite bioKepler, please use the following reference:. In: Proceedings of the Workshop on Data analytics in the Cloud at EDBT/ICDT 2012 Conference, DanaC2012, 2012, pp 73-78.

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bioKepler | Bioinformatics Scientific Workflow Module | biokepler.org Reviews

https://biokepler.org

Skip to main content. A Comprehensive Bioinformatics Scientific Workflow Module for Distributed Analysis of Large-Scale Biological Data. BioKepler is a module that is distributed on top of the core Kepler scientific workflow system. Please refer to the Kepler collaboration website. For more information on Kepler in general. To cite bioKepler, please use the following reference:. In: Proceedings of the Workshop on Data analytics in the Cloud at EDBT/ICDT 2012 Conference, DanaC2012, 2012, pp 73-78.

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biokepler.org

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Workflow Demos | bioKepler

https://www.biokepler.org/demos

Skip to main content. Fraggene scan parse.pl. Orf 2 tbl.pl. Qc filter fastq.pl. Qc filter fasta qual. BioKepler is funded by NSF DBI-1062565. Under CI Reuse and Advances in Bioinformatics programs. Any opinions, findings and conclusions or recomendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation (NSF).

2

Video Tutorials | bioKepler

https://www.biokepler.org/publications/videos

Skip to main content. This page contains videos describing how to use bioKepler. bioKepler's YouTube channel. Also hosts video tutorials. 1 Starting bioKepler and running the demo workflows. 2 Find and starting the bioKepler image on Amazon EC2. BioKepler is funded by NSF DBI-1062565.

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bioKepler | Bioinformatics Scientific Workflow Module

https://www.biokepler.org/home

Skip to main content. A Comprehensive Bioinformatics Scientific Workflow Module for Distributed Analysis of Large-Scale Biological Data. BioKepler is a module that is distributed on top of the core Kepler scientific workflow system. Please refer to the Kepler collaboration website. For more information on Kepler in general. Register as a bioKepler User to See a List of Demos. To cite bioKepler, please use the following reference:. BioKepler is funded by NSF DBI-1062565.

4

Instructions for Downloading bioKepler From SVN | bioKepler

https://www.biokepler.org/biokepler-svn

Skip to main content. Instructions for Downloading bioKepler From SVN. These are instructions for downloading and compiling bioKepler from SVN. The instructions for downloading bioKepler 1.2 are here. Verify the following software is installed before downloading bioKepler. Java 7 or newer:. Ant 18.2 or newer:. SVN 16 or newer:. Maven 3.0.3 or newer:. To use bioKepler, download and compile Kepler as follows:. Create a directory for the Kepler modules. Download the Kepler build system.

5

Instructions for Downloading bioKepler 1.1 | bioKepler

https://www.biokepler.org/install-biokepler-1.1

Skip to main content. Instructions for Downloading bioKepler 1.1. This page contains instructions for downloading bioKepler 1.1, which was released on 23 December 2014. You can download the. Instructions about downloading bioKepler from SVN are. Instructions for Downloading bioKepler 1.1. Download Kepler 2.4:. Install and start Kepler 2.4. You should see:. After Kepler 2.4 starts, a dialog will pop up displaying updates. And Kepler will install the updates and restart. Once Kepler restarts, in the Tools.

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Projects | Kate Kaya

http://www.katekaya.com/projects

Skip to main content. Center for Academic Research and Training in Anthropogeny (CARTA). To explore and explain the origins of the human phenomenon. April 2012 - present. Kavli Institute for Brain and Mind (KIBM). Furthers understanding of the origins, evolution and mechanisms of human cognition, from the brain's physical and biochemical machinery to the experiences and behaviors called the mind. March 2016 - present. Extreme Science and Engineering Discovery Environment (XSEDE). March 2008 - present.

katekaya.com

Projects | Kate Kaya

http://www.katekaya.com/kate/projects

Skip to main content. Center for Academic Research and Training in Anthropogeny (CARTA). To explore and explain the origins of the human phenomenon. April 2012 - present. Kavli Institute for Brain and Mind (KIBM). Furthers understanding of the origins, evolution and mechanisms of human cognition, from the brain's physical and biochemical machinery to the experiences and behaviors called the mind. March 2016 - present. Extreme Science and Engineering Discovery Environment (XSEDE). March 2008 - present.

swat.sdsc.edu

Projects | Workflows for Data Science Center

http://swat.sdsc.edu/projects

Skip to main content. Workflows for Data Science Center. BBDTC: Biomedical Big Data Training Collaborative. IPPD: Integrated end-to-end Performance Prediction and Diagnosis for Extreme Scientific Workflows. WIFIRE: A Scalable Data-Driven Monitoring, Dynamic Prediction and Resilience Cyberinfrastructure for Wildfires. BioKepler: A Comprehensive Bioinformatics Scientific Workflow Module for Distributed Analysis of Large-Scale Biological Data. NBCR: National Biomedical Computation Resource. REAP project inv...

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bioKepler | Bioinformatics Scientific Workflow Module

Skip to main content. A Comprehensive Bioinformatics Scientific Workflow Module for Distributed Analysis of Large-Scale Biological Data. BioKepler is a module that is distributed on top of the core Kepler scientific workflow system. Please refer to the Kepler collaboration website. For more information on Kepler in general. To cite bioKepler, please use the following reference:. In: Proceedings of the Workshop on Data analytics in the Cloud at EDBT/ICDT 2012 Conference, DanaC2012, 2012, pp 73-78.

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