thewinnower.com
The Winnower | Avoid having to retract your genomics analysis.
https://www.thewinnower.com/papers/1052-avoid-having-to-retract-your-genomics-analysis
Avoid having to retract your genomics analysis. 1 Queen Mary University of London. Avoid having to retract your genomics analysis. Biology is a data-science. The dramatic plunge in DNA sequencing costs. Means that a single MSc or PhD student can now generate data that would have cost $15,000,000 only ten years ago. We are thus leaping from lab-notebook-scale science to research that requires extensive programming, statistics and high performance computing. With little knowledge of best practices;. Leadin...
wurmlab.github.io
Wurm Lab - Yannick Wurm' News
https://wurmlab.github.io/news
Ants, Bees, Genomes and Evolution. Queen Mary University London. Excellent work by GSoC Bioinformatics students. Google summer of code 2016 has just came to an end. Thanks to our host organisations Open Genome Informatics. And Open Bioinformatics Foundation. We’ve had a productive summer with two excellent students. Both students wrote blog posts summarizing their work. Created novel BLAST result visualization methods for SequenceServer. He wrote an overview of his work. September 1, 2016. Problem statem...
thedaoofflow.fluxionary.net
the dao of flow − BOSC 2015 wrap up
http://thedaoofflow.fluxionary.net/2015/07/bosc-2015-wrap-up/trackback
The dao of flow. BOSC 2015 wrap up. Posted July 13th, 2015 by konrad. I am just back from this year’s BOSC. Had more than 3000 tweets! Can have look at the storyfied collections ( day 1. Some of the photos I took are on flickr. Despite the broad range of topics certain patterns were crearly detectable:. 1) Docker, docker, docker. There was barely a talk that did not mention docker. Or other container implementations) is here to stay. 2) Common Workflow Language. The Common Workflow Language. URIs for sci...
thedaoofflow.fluxionary.net
the dao of flow − BOSC 2015 wrap up
http://thedaoofflow.fluxionary.net/2015/07/bosc-2015-wrap-up
The dao of flow. BOSC 2015 wrap up. Posted July 13th, 2015 by konrad. I am just back from this year’s BOSC. Had more than 3000 tweets! Can have look at the storyfied collections ( day 1. Some of the photos I took are on flickr. Despite the broad range of topics certain patterns were crearly detectable:. 1) Docker, docker, docker. There was barely a talk that did not mention docker. Or other container implementations) is here to stay. 2) Common Workflow Language. The Common Workflow Language. URIs for sci...
wurmlab.github.io
Wurm Lab - tools and code
https://wurmlab.github.io/tools
Ants, Bees, Genomes and Evolution. Queen Mary University London. Major tools that we develop include:. BLAST is the most commonly used bioinformatics tool. But setting it up for private data and using it is counter-intuitive. We developed SequenceServer to make BLAST easy to use. Downloaded over 30,000 times. Tool to identify problematic gene predictions based on comparison with gene predictions in public databases. Funded by NESCent Google Summer of Code 2013. NeuroPeptide Search uses the common feature...
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