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Andrey Gurtovenko research home pageA research home page of Andrey Gurtovenko
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A research home page of Andrey Gurtovenko
http://www.biosimu.org/
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Andrey A Gurtovenko
197110, g.●●●●●●●●●●erburg, Pe
n●a , 197110
RU
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Denis Imshenetsky
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Andrey Gurtovenko research home page | biosimu.org Reviews
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A research home page of Andrey Gurtovenko
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In this section you can find coordinate files of various lipid membranes; the files are given in PDB format so that they can easily be visualized with a molecular graphics software such as VMD. All the coordinate files are taken from published works; if you use them in your own work, please do cite the corresponding papers which are provided for each structure. Please note: we do not guarantee that the files are error-free. Pc-pe 100ns.tar.gz. 2B ps-pc 100ns.tar.gz. 2B ps-pe 100ns.tar.gz. A water pore in...
Andrey Gurtovenko research home page
http://www.biosimu.org/index.html
BioSimu.org is a research website of Andrey Gurtovenko. February 16, 2016. Professorship of the Russian Academy of Sciences. Decision of the Presidium of RAS (in Russian). October 2, 2015. Contributed talk: 3rd European Joint Theoretical/Experimental Meeting on Membranes (EJTEMM 2015), Stockholm, Sweden, September 30 - October 2, 2015. September 7, 2015. Contributed talk: 1st World Congress on Electroporation, Portoroz, Slovenia, September 6-10, 2015. June 4, 2015. Journal of Physical Chemistry B Cover.
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Image Gallery Page 1 of 4. A double bilayer system with the salt-free water reservoir between the two bilayers, and the “outer” water reservoir with NaCl salt (sodium and chloride ions are shown by red and green spheres, respectively). Shown is the final structure after 50 ns of MD simulations. A A Gurtovenko, J. Chem. Phys. 122, 244902 (2005). A A Gurtovenko, I. Vattulainen, J. Phys. Chem. B 112, 4629 (2008). A A Gurtovenko, I. Vattulainen, J. Am. Chem. Soc. 129, 5358 (2007). DMSO-induced lipid flip-flo...
Publication list
http://www.biosimu.org/publications/index.html
Publication list of Andrey Gurtovenko. A Yu Kostritskii, D. A. Kondinskaia, A. M. Nesterenko, and A. A. Gurtovenko. Adsorption of Synthetic Cationic Polymers on Model Phospholipid Membranes: Insight from Atomic-Scale. Molecular Dynamics Simulations, submitted (2016). D A Kondinskaia, A. Yu. Kostritskii, A. M. Nesterenko, A. Yu. Antipina, and A. A. Gurtovenko. Olecular Dynamics Simulations of DNA-Polycation Complexes: Two Distinct Binding Patterns. Journal of Physical Chemistry B. 119, 6638 - 6645 (2015).
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Andrey Gurtovenko research home page
BioSimu.org is a research website of Andrey Gurtovenko. December 15, 2016. J Phys Chem Lett publication. What Can We Learn about Cholesterol's Transmembrane Distribution Based on Cholesterol-Induced Changes in Membrane Dipole Potential? October 27, 2016. Two papers on biomedical applications of cationic polymers. Atomic-Scale Molecular Dynamics Simulations of DNA-Polycation Complexes: Two Distinct Binding Patterns. J Phys. Chem. B 120, 6546-6554 (2016). Langmuir 32, 10402-10414 (2016). February 16, 2016.
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BioSimWare | A software for stochastic modelling, simulation and analysis of biological systems
A software for stochastic modelling, simulation and analysis of biological systems. BioSimWare is a free software that allows the mechanistic modelling, stochastic simulation and analysis of complex biological systems. BioSimWare is based on a simple modelling approach, which consists in describing the system under investigation through reagents products reactions that represent the interactions between molecular species. Computational tools available in BioSimWare. Stochastic simulation algorithms for m...
The Simz Arena - on simulation of protein interact
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