bmkeg.github.io

The Biomedical Knowledge Engineering Group (BMKEG)

The Biomedical Knowledge Engineering Group (BMKEG). BMKEG is an academically-funded, applied computer science research group. We take cutting-edge computer science (CS) research in the field of artificial intelligence and apply it to biomedicine across multiple fields based on requirements of end-users. Our focus is on the development of practical tools that may be used by knowledge workers in their everyday work. View on GitHub BMKEG. Even though text mining research is an active field in biomedicine ('...

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The Biomedical Knowledge Engineering Group (BMKEG) | bmkeg.github.io Reviews

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The Biomedical Knowledge Engineering Group (BMKEG). BMKEG is an academically-funded, applied computer science research group. We take cutting-edge computer science (CS) research in the field of artificial intelligence and apply it to biomedicine across multiple fields based on requirements of end-users. Our focus is on the development of practical tools that may be used by knowledge workers in their everyday work. View on GitHub BMKEG. Even though text mining research is an active field in biomedicine ('...

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1 projects

2 the bioscholar system

3 lab notes

4 all source

5 webapp source

6 academia

7 the sciknowmine system

8 technical documentation

9 app source

10 previous version

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The Biomedical Knowledge Engineering Group (BMKEG) | bmkeg.github.io Reviews

https://bmkeg.github.io

The Biomedical Knowledge Engineering Group (BMKEG). BMKEG is an academically-funded, applied computer science research group. We take cutting-edge computer science (CS) research in the field of artificial intelligence and apply it to biomedicine across multiple fields based on requirements of end-users. Our focus is on the development of practical tools that may be used by knowledge workers in their everyday work. View on GitHub BMKEG. Even though text mining research is an active field in biomedicine ('...

INTERNAL PAGES

bmkeg.github.io

1

Modeling Experimental Design for Big Mechanisms

http://bmkeg.github.io/bigMechKefedJavaWorkbook

Modeling Experimental Design for Big Mechanisms. Here, we model the data structure based on 'observables' within systems biology studies to develop a library of 'motif's that may be composed together to represent the scientific observations generated within studies of cancer pathways. View the Project on GitHub BMKEG/bigMechKefedJavaWorkbook. Pages indexed by Month and Year. Dry Run II Papers from MITRE. Two-Hop Ras BioPax Model. Open Access Pathway Logic Papers and Figures. Pathway Logic Experiment Types.

2

Lapdftext by BMKEG

http://bmkeg.github.io/lapdftext

View on GitHub BMKEG. The Biomedical Knowledge Engineering Research Group (BMKEG) is part of the Intelligent Systems Division at the University of Southern California's Information Sciences Institute. Welcome to the LA-PDFText Technical Documentation. The system is intended to provide a practical low-level methodology for extracting text from PDF documents (primarily scientific papers) for incorporation into text mining workflows. Recommended Use of the System.

3

SciKnowMine Web Application by BMKEG

http://bmkeg.github.io/sciKnowMine

The SciKnowMine system is a practical, open-source, text-mining-enabled. Digital library system for knowledge workers in biomedicine (including students, scientists, biocurators, doctors, etc.). View on GitHub BMKEG. The Biomedical Knowledge Engineering Research Group (BMKEG) is part of the Intelligent Systems Division at the University of Southern California's Information Sciences Institute. Welcome to the SciKnowMine Technical Documentation. Biocuration team at the Jackson Laboratory. Web Application -...

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isi.edu

The 'Building a Breakthrough Machine' Research Initiative

http://www.isi.edu/research_groups/bmkeg/building_breakthrough_machine_research_initiative

Biomedical Knowledge Engineering Group. Knowledge Engineering Enabled Neuroscience (KEEN). Knowledge Engineering from Experimental Design (KEfED). The 'Building a Breakthrough Machine' Research Initiative. ISI Seminars and Events. ISI: Meet Our Researchers. The 'Building a Breakthrough Machine' Research Initiative. An almost-identical high-level view has been recently echoed by other leading researchers attempting to construct systems that can reason scientifically (see Figure 1 from [Soldatova 2011] or ...

isi.edu

Home

http://www.isi.edu/research_groups/bmkeg/home

Biomedical Knowledge Engineering Group. Knowledge Engineering Enabled Neuroscience (KEEN). Knowledge Engineering from Experimental Design (KEfED). ISI Seminars and Events. ISI: Meet Our Researchers. Here is a short ISI promotional video about my work: http:/ www.youtube.com/watch? See this slide show by Gully Burns. At Google to provide an in-depth introduction to our work: http:/ www.youtube.com/watch? In brief, we develop practical, knowledge-centric solutions for biomedical researchers. We focus o...

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The Biomedical Knowledge Engineering Group (BMKEG)

The Biomedical Knowledge Engineering Group (BMKEG). BMKEG is an academically-funded, applied computer science research group. We take cutting-edge computer science (CS) research in the field of artificial intelligence and apply it to biomedicine across multiple fields based on requirements of end-users. Our focus is on the development of practical tools that may be used by knowledge workers in their everyday work. View on GitHub BMKEG. Even though text mining research is an active field in biomedicine ('...

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