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BROP :: Bioinformatics Resource for Oral Pathogens

Bioinformatics Resource for Oral Pathogens

http://www.brop.org/

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CONTACTS AT BROP.ORG

The Forsyth Institute

Tsute Chen

140●●●way

Bo●●on , Massachusetts, 02115

US

1.61●●●●8359
tc●●●@forsyth.org

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The Forsyth Institute

Tsute Chen

140●●●way

Bo●●on , Massachusetts, 02115

US

1.61●●●●8359
tc●●●@forsyth.org

View this contact

The Forsyth Institute

Tsute Chen

140●●●way

Bo●●on , Massachusetts, 02115

US

1.61●●●●8359
tc●●●@forsyth.org

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BROP :: Bioinformatics Resource for Oral Pathogens | brop.org Reviews
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Bioinformatics Resource for Oral Pathogens
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BROP :: Bioinformatics Resource for Oral Pathogens | brop.org Reviews

https://brop.org

Bioinformatics Resource for Oral Pathogens

SUBDOMAINS

array.brop.org array.brop.org

OPMD Home :: BROP :: OPMD

MyOPMD: An Online Microarray Data Management Tools. Oral Pathogen Micorarray Database (OPMD) Public Access. Or Log in with an account. Supplemental Data in Publications. Significance Analysis of Oral Pathogen Microarray Data (SAOPMD). Microarray data in BROP Genome Viewer.

genome.brop.org genome.brop.org

BROP :: Genomic Tools

Available Tools and Databases. Fusobacterium nucleatum subsp. nucleatum. Fusobacterium nucleatum subsp. polymorphum. Challis CH1, ATCC 35105, NCTC7868. UA 159, ATCC 700610. 92A2 not ATCC 43037, FDC 338. ATCC 35405, DSM 14222.

INTERNAL PAGES

brop.org brop.org
1

BROP :: Bioinformatics Resource for Oral Pathogens

http://www.brop.org/index.php

Enomics Tools for Oral Pathogens. Icroarray: Oral Pathogen Microarray Database (OPMD). YOPMD: Manage Microarray Data. AOPMD: Signficance Analysis of OPMD Data. Oal: Genomewide ORF Alignment. Last against Oral Pathogens. Pec: Oral Pathogen Entrez Counter. Bull; User's Guide. Bull; Site Statistics. Bull; Terms of Use. Bull; Privacy Policy. New Genome Annotation Available - Porphyromonas gingivalis ATCC 33277. Oct 15, 2008 - 04:02 PM. The automatic annotation for the new genome - Porphyromonas gingivalis.

2

BROP :: Bioinformatics Resource for Oral Pathogens

http://www.brop.org/index.php?name=News&amp;catid=2

Enomics Tools for Oral Pathogens. Icroarray: Oral Pathogen Microarray Database (OPMD). YOPMD: Manage Microarray Data. AOPMD: Signficance Analysis of OPMD Data. Oal: Genomewide ORF Alignment. Last against Oral Pathogens. Pec: Oral Pathogen Entrez Counter. Bull; User's Guide. Bull; Site Statistics. Bull; Terms of Use. Bull; Privacy Policy. New Genome Annotation Available - Porphyromonas gingivalis ATCC 33277. Oct 15, 2008 - 04:02 PM. The automatic annotation for the new genome - Porphyromonas gingivalis.

3

BROP :: Bioinformatics Resource for Oral Pathogens

http://www.brop.org/modules.php?op=modload&name=Entrez&file=index

Enomics Tools for Oral Pathogens. Icroarray: Oral Pathogen Microarray Database (OPMD). YOPMD: Manage Microarray Data. AOPMD: Signficance Analysis of OPMD Data. Oal: Genomewide ORF Alignment. Last against Oral Pathogens. Pec: Oral Pathogen Entrez Counter. Bull; User's Guide. Bull; Site Statistics. Bull; Terms of Use. Bull; Privacy Policy. Total number of NCBI Entrez. Records related to Oral Pathogens. Click each row to see the detail list. Last update of this list: Wed, January 30, 2008 - 02 AM.

4

BROP :: Bioinformatics Resource for Oral Pathogens

http://www.brop.org/user.php?op=loginscreen&module=NS-User

Enomics Tools for Oral Pathogens. Icroarray: Oral Pathogen Microarray Database (OPMD). YOPMD: Manage Microarray Data. AOPMD: Signficance Analysis of OPMD Data. Oal: Genomewide ORF Alignment. Last against Oral Pathogens. Pec: Oral Pathogen Entrez Counter. Bull; User's Guide. Bull; Site Statistics. Bull; Terms of Use. Bull; Privacy Policy. Cookies must be enabled past this point.

5

BROP :: Bioinformatics Resource for Oral Pathogens

http://www.brop.org/modules.php?op=modload&name=BlastTable&file=index

Enomics Tools for Oral Pathogens. Icroarray: Oral Pathogen Microarray Database (OPMD). YOPMD: Manage Microarray Data. AOPMD: Signficance Analysis of OPMD Data. Oal: Genomewide ORF Alignment. Last against Oral Pathogens. Pec: Oral Pathogen Entrez Counter. Bull; User's Guide. Bull; Site Statistics. Bull; Terms of Use. Bull; Privacy Policy. Blast Search Against Oral Pathogens. All oral pathogens combined. ORFs (a.a.). ORFs (a.a.). ORFs (a.a.). ORFs (a.a.). ORFs (a.a.). ORFs (a.a.). ORFs (a.a.).

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nar.oxfordjournals.org nar.oxfordjournals.org

The bioinformatics resource for oral pathogens

http://nar.oxfordjournals.org/cgi/content/full/33/suppl_2/W734

View Current Issue (Volume 44 Issue 14 19 August 2016). The bioinformatics resource for oral pathogens. The Forsyth Institute 140 Fenway, Boston, MA 02115, USA. To whom correspondence should be addressed. Tel: 1 617 892 8359; Fax: 1 617 262 5200; Email: tchen{at}forsyth.org. January 21, 2005. February 22, 2005. February 22, 2005. Over the past few years, several important oral pathogens have been completely or partially sequenced [for a review see ( 1. While these independently maintained databases provi...

bioinformatics.forsyth.org bioinformatics.forsyth.org

MTD: Microbial Transcriptome Database ::

http://bioinformatics.forsyth.org/mtd

New probe set from NCBI microbial genomes. Unlisted or propriety genomes. Transcriptome Profile Detected by Direct RNA Labeling. Dynamic Transcriptome Profile Analysis. Strains W83 vs ATCC33277. Tools for Drawing Circular Transcriptome Maps. Tiling Microarray Probe Sets. View in Genome Viewer. View in Transcriptome Viewer. Comprehensive Transcriptome Analysis of the Periodontopathogenic Bacterium Porphyromonas gingivalis. W83 (J.Bacteriol. 194:100-114, 2012). Tools for Analyzing RNAseq tracriptomic Data.

bioinformatics.forsyth.org bioinformatics.forsyth.org

Forsyth Bioinformatics Core :: Forsyth Bioinformatics

http://bioinformatics.forsyth.org/index.php

Welcome to Forsyth Bioinformatics Core Web Site! Databases And Research Projects:. The Human Oral Microbiome Database. The Bioinformatics Resource for Oral Pathogens. The Human Oral Microbe Identification Microarray Data Analysis. The Microbial Transcriptome Database. GCG / EMBOSS Molecular Biology Software Package (Intranet Only). Next Genereation Sequencing Data Analysis. Genomic Sequencing, Assembly, and Annotation. Microbiome Profiling with 16S rRNA Deep Sequencing. Tsute (George) Chen,.

globalmedicalresearch.org globalmedicalresearch.org

Medical Resources – News, Data, Libraries | Global Medical Research.org

http://globalmedicalresearch.org/wordpress/resources-databases-online-libraries

Cancer Datasets and Databases. Lung & Respiratory Disease Datasets. Rare Disease Datasets – Databases. Medical Resources – News, Data, Libraries. Medical Research Libraries Online. National Library of Medicine Medical Subject Headings. Semantic Searching of PubMed Abstracts. Tim Berners-Lee and the Semantic Web. Members & Researchers. Bill & Melinda Gates Foundation. Columbia University Medical Center. Harvard School of Medicine. Howard Hughes Medical Institute. Oxford University – Medical Research.

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BROP :: Bioinformatics Resource for Oral Pathogens

Enomics Tools for Oral Pathogens. Icroarray: Oral Pathogen Microarray Database (OPMD). YOPMD: Manage Microarray Data. AOPMD: Signficance Analysis of OPMD Data. Oal: Genomewide ORF Alignment. Last against Oral Pathogens. Pec: Oral Pathogen Entrez Counter. Bull; User's Guide. Bull; Site Statistics. Bull; Terms of Use. Bull; Privacy Policy. New Genome Annotation Available - Porphyromonas gingivalis ATCC 33277. Oct 15, 2008 - 04:02 PM. The automatic annotation for the new genome - Porphyromonas gingivalis.

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