browser.planteome.org

dev.planteome.org

Planteome: Term Details for "molecular_function" (GO:0003674)

http://dev.planteome.org/amigo/term/GO:0003674

You are using the development site of the Planteome ontology browser. See here. For the live browser. Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions. See term history for GO:0003674. To all annotated objects. Annotated to molecular function. To all direct and indirect annotations. To all direct and indirect annotations download. Contact the Planteome feedback. Translation...

dev.planteome.org

Planteome: Tools and Resources

http://dev.planteome.org/amigo/software_list

You are using the development site of the Planteome ontology browser. See here. For the live browser. Allows simple quick searches using autocomplete and the new SOlr backend. And filter the Planteome data as you type. These pages allow you to use a powerful search syntax (including boolean operators). Associations between Planteome terms and bioentities. Ontology Term, Synonym, or Definition. Bioentities associated with ontology terms. Can give a high-level view of what kind of data is available in AmiGO.

dev.planteome.org

Planteome: Term Details for "cellular_component" (GO:0005575)

http://dev.planteome.org/amigo/term/GO:0005575

You are using the development site of the Planteome ontology browser. See here. For the live browser. Cell or subcellular entity, cellular component, subcellular entity. The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together. To all annotated objects.

planteome.org

About | Planteome

http://www.planteome.org/node/9

Coordination with Outside Groups. The cROP project is a heavily collaborative project that depends on coordination with several national and international projects. Existing and new collaborations are of following four types:. Development and enrichment of new and existing reference ontologies for plants. Ontology use. Annotating the gene expression profiles and phenotypes in OMICs and Tree of Life projects and sharing the annotations with cROP data warehouse. Planteome by http:/ planteome.org. Barry Smi...

planteome.org

Feed aggregator | Planteome

http://www.planteome.org/aggregator

Planteome by http:/ planteome.org. Is licensed under a Creative Commons Attribution-NoDerivs 3.0 United States License. Based on a work at planteome.org. Planteome is an international collaborative effort. And is supported by primary funding ( IOS:1340112 award. From the National Science Foundation of USA. Latest Tweets from @Planteome. Barry Smith, from system sustainability to planet sustainability. SDGIO https:/ t.co/BfUk2q5jhA. 3 weeks 1 day. Video of the #ICBO2016. 3 weeks 1 day. 6 weeks 1 day.

planteome.org

Ontology Search | Planteome

http://www.planteome.org/node/8

Search or Browse the Planteome Ontology Database. Example Searches: type 'endosperm' or 'PO:0009089' and select 'ontology terms'. Type: CONSTANS or AT5G15850 and select 'Annotations'. More options: Browse Ontologies. Planteome by http:/ planteome.org. Is licensed under a Creative Commons Attribution-NoDerivs 3.0 United States License. Based on a work at planteome.org. Planteome is an international collaborative effort. And is supported by primary funding ( IOS:1340112 award. Latest Tweets from @Planteome.

planteome.org

Tools | Planteome

http://www.planteome.org/node/3

AISO (Annotation of Image Segments with Ontologies). AISO is a freely available, Java-based desktop application. It currently available on Linux, Mac OS X (64-bit), and Windows (32-bit). AISO is developed as part of the Plant Ontology. Project (NSF Award #0822201. The most recent version of AISO (including installation instructions). View mock annotations using the AISO. Community Annotation Wiki Prototype. Planteome by http:/ planteome.org. Based on a work at planteome.org. Latest Tweets from @Planteome.

planteome.org

Request Ontology Terms | Planteome

http://www.planteome.org/node/2

Please submit the ontology-related term requests by visiting the following GitHub request trackers. Only registered users of the GitHub website. Are allowed to submit requests and make suggestions or comments. Please register and login. Plant Ontology (PO) [ submit PO term request. Plant Trait Ontology (TO) [ submit TO term request. Plant Environment Ontology (EO) [ submit EO term request. Plant Disease Ontology/Plant Stress Ontology (PDO/PSO) [ submit PSO term request]. Latest Tweets from @Planteome.

planteome.org

Documents | Planteome

http://www.planteome.org/node/4

Annotation data files. All files must be provided in the standardized GAF 2.0 format. Data Association file format 2.0. Source: Gene Ontology Project). For use in annotation data files. Relations used in the Planteome Ontologies. Planteome by http:/ planteome.org. Is licensed under a Creative Commons Attribution-NoDerivs 3.0 United States License. Based on a work at planteome.org. Planteome is an international collaborative effort. And is supported by primary funding ( IOS:1340112 award. 3 weeks 1 day.

planteome.org

Internal | Planteome

http://www.planteome.org/internal

Internal links for the Planteome group members and associates:. Login to Drupal Site. Planteome by http:/ planteome.org. Is licensed under a Creative Commons Attribution-NoDerivs 3.0 United States License. Based on a work at planteome.org. Planteome is an international collaborative effort. And is supported by primary funding ( IOS:1340112 award. From the National Science Foundation of USA. Latest Tweets from @Planteome. 3 weeks 1 day. Video of the #ICBO2016. Keynote talk by Dennis Stevenson @NYBG.