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Brain Transcriptome Database

The Brain Transcriptome Database (BrainTx) project aims to create an integrated platform to visualize and analyze our original transcriptome data and publicly accessible transcriptome data related to the genetics that underlie the development, function, and dysfunction stages and states of the brain.

http://cdtdb.neuroinf.jp/

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Brain Transcriptome Database | cdtdb.neuroinf.jp Reviews
<META>
DESCRIPTION
The Brain Transcriptome Database (BrainTx) project aims to create an integrated platform to visualize and analyze our original transcriptome data and publicly accessible transcriptome data related to the genetics that underlie the development, function, and dysfunction stages and states of the brain.
<META>
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1 BrainTx
2 CDT-DB
3 mouse
4 cerebellum
5 cerebellar
6 hippocampus
7 gene expression
8 transcriptome
9 postnatal development
10 in situ hybridization
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quick serch,keyword / gene,brain distribution,brain specificity,gene id search,ncbi entrez gene id,cd id,all expression,characteristic expression,your selection,full data search,what's new,experimental data,fluorescent,differential,display,developmental
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Brain Transcriptome Database | cdtdb.neuroinf.jp Reviews

https://cdtdb.neuroinf.jp

The Brain Transcriptome Database (BrainTx) project aims to create an integrated platform to visualize and analyze our original transcriptome data and publicly accessible transcriptome data related to the genetics that underlie the development, function, and dysfunction stages and states of the brain.

INTERNAL PAGES

cdtdb.neuroinf.jp cdtdb.neuroinf.jp
1

ISH Atlas | Brain Transcriptome Database

http://cdtdb.neuroinf.jp/CDT/ReferISHAtlas.do

Select: " Gene Expression Brain Atlas. Or " Appendix: Developing Mouse Brain Atlas. Gene Expression Brain Atlas (ISH). P7-WM, Od/ P21-WM, Od. P7-PC/ P21-St, Ba, PC. P7-PCL, WM/ P21-St, Ba, PC, Go. P7-EGL, IGL/ P21-GC. P7-IGL, UBC, LC/ P21-GC, UBC, LC. P7-IGL/ P21-St, Ba, GC. P7-Go/ P21-Ba, Go. P7, P21-Go, small Sst positive cell. P7-PC, Go, WM/ P21-St, Ba, PC, Go. P7-Ba, PC, Go, WM/ P21-St, Ba, PC, Go. P7-WM, BG, As/ P21-WM, BG, As. P7-WM, Od/ P21-WM, Od. P7-iEGL, IGL/ P21-GC.

2

Help | Brain Transcriptome Database

http://cdtdb.neuroinf.jp/CDT/Help.jsp

1 Necessary conditions for use of the BrainTx. 3 Search Menu legends. 5 Expression Data Search- spatial expression. 6 Expression Data Search- temporal expression. 7 Expression Data Search- expression peak stage. 8 Expression Data Search- brain distribution. 9 Expression Data Search- brain specificity. 14 Tissue information (brain specificity). 15 Gene Ontology search function. 16 Gene category and "Gene expression graph" function. 17 My List function. Necessary conditions for use of the BrainTx. You can ...

3

Gene Category | Brain Transcriptome Database

http://cdtdb.neuroinf.jp/CDT/ReferGeneCategory.do

How to display Gene Category graph on your computer. 1 Install the "Java" to your computer ( En. The Java installer for Windows and Mac OS can be obtained from the Java web site.). 2 For Google Chrome users, use a different web browser. Internet Explorer, Firefox, Safari, etc.). Carbohydrate, lipid, and amino-acid metabolism-related genes. Cell adhesion and recognition-related genes. Cell cycle and cell proliferation-related genes. Chromosome, chromatin, and nuclear protein-related genes.

4

Download | Brain Transcriptome Database

http://cdtdb.neuroinf.jp/CDT/Download.do

BrainTx Users Guide ver5.0.pdf. BrainTx Ver.5.0 Users Guide. Information on CDT-DB.pdf.

5

About CDT | Brain Transcriptome Database

http://cdtdb.neuroinf.jp/CDT/About.jsp

1 Brain Transcriptome Database (BrainTx) Project. 1-4 How to create URL links to the BrainTx. 2 Information about CD genes in BrainTx. 2-1 Information about CD genes. 2-2 Search for CD genes and spatiotemporal gene expression patterns. 3 Information about the gene expression profiling data. 1 Brain Transcriptome Database (BrainTx) Project. We will not attempt to collect your personal information when you visit this website; moreover, if you email us, we will respond to your email, but will not otherwise ...

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neuroinf.jp neuroinf.jp

INCF Japan Node

http://www.neuroinf.jp/modules/sitemap

NIJC Neuroinformatics Japan Center. Japan Node Platforms Update Information. Neuroinformatics Platform Infrastructure Software. Members of PF Committees. NIJC Neuroinformatics Japan Center. Resources at a Glance. Neuroinformatics Platform Infrastructure Software. Documents (Brochure Poster etc. ). Documents (Brochure Poster etc. ). Members of PF Committees.

neuroinf.jp neuroinf.jp

INCF Japan Node

http://www.neuroinf.jp/modules/aboutus/index.php?content_id=21

NIJC Neuroinformatics Japan Center. Japan Node Platforms Update Information. Neuroinformatics Platform Infrastructure Software. Members of PF Committees. OECD Mega Science Forum, Lounching of the Neuroinfomatics Working Group. OECD Mega Science Forum. Bioinformarmatics Proposal. Topic succeeded to OECD Global Science Forum. Proposal made to OECD CSTP. INCF launched (Kalolinska Institute, Sweden);. Governing Board Chair: Sten Grillner, Deputy Chair: Shun-ichi Amari. Develop the Visiome Platform.

lm.lncc.br lm.lncc.br

Neuromuscular Disorders

http://www.lm.lncc.br/neuromuscularDisorders

Brain diseases databases links. Duchenne Muscular Dystrophy(DMD) and Becker Muscular Dystrophy (BMD). Limb Girdle Muscular Dystrophies (LGMD). Congenital Muscular Dystrophy (CMD). Facioscapulohumeral Muscular Dystrophy (FSHD). Emery-Dreifuss Muscular Dystrophy (EDMD). Myotonic Dystrophy Types 1 (DM1) and 2 (DM2). Changes in miRNA expression are associated with various skeletal muscle disorders, such as muscular dystrophies. Recent studies have uncovered a cadre of muscle-specific microRNAs that regul...

bsi-ni.brain.riken.jp bsi-ni.brain.riken.jp

BSI-Neuroinformatics - BSI Research Database Portal

http://bsi-ni.brain.riken.jp/index.html.en

BSI-Neuroinformatics - BSI Research Database Portal. Databases and tools created by BSI laboratories can be accessed from this website. We hope many neuroscience databases including tools (e.g. software) will be collected in this website and promote further development of brain research. New Database has been added on BSI-NI Website. NIJC recently has started a new repository service for BSI-NI. Marmoset-the MRI Standard brain. Japanese Macaque Monkey-the MRI standard brain. INCF Japan Node Platform.

neuroinf.jp neuroinf.jp

INCF Japan Node

http://www.neuroinf.jp/modules/aboutus/index.php?content_id=4

NIJC Neuroinformatics Japan Center. Japan Node Platforms Update Information. Neuroinformatics Platform Infrastructure Software. Members of PF Committees. About INCF Japan Node. The Japan Node of the INCF coordinates neuroinformatics activities within Japan and represents Japanese efforts in INCF. The activities of the Japan Node. Shaping domestic neuroinformatics research and directions (Japan Node Committee). Developing and publishing brain science databases (Platform Subcommittee). Yukiyasu KAMITANI, D...

neuroinf.jp neuroinf.jp

INCF Japan Node

http://www.neuroinf.jp/modules/aboutus/index.php?content_id=1

NIJC Neuroinformatics Japan Center. Japan Node Platforms Update Information. Neuroinformatics Platform Infrastructure Software. Members of PF Committees. Neuroinformatics attempts to synthesize the diverse and complex information emerging in neuroscience by integrating tools generated in information science. The three principal aims of neuroinformatics are :. International Neuroinformatics Coordinating Facility. INCF) was established through the OECD Global Science Forum. Organizes working groups in seve...

neuroinf.jp neuroinf.jp

INCF Japan Node

http://www.neuroinf.jp/user.php

NIJC Neuroinformatics Japan Center. Japan Node Platforms Update Information. Neuroinformatics Platform Infrastructure Software. Members of PF Committees. Login using your account with.

neuroinf.jp neuroinf.jp

INCF Japan Node

http://www.neuroinf.jp/modules/credits

NIJC Neuroinformatics Japan Center. Japan Node Platforms Update Information. Neuroinformatics Platform Infrastructure Software. Members of PF Committees.

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Brain Transcriptome Database

The Brain Transcriptome Database ( BrainTx. Project aims to create an integrated platform to visualize and analyze our original transcriptome data and publicly accessible transcriptome data related to the genetics that underlie the development, function, and dysfunction stages and states of the brain. BrainTx was developed from the Cerebellar Development Transcriptome Database (CDT-DB). Information about CDT-DB can be downloaded using the "Download" option in the menu bar. Gene Name and Keyword Search.

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