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The Scruffy Old Scientist

The Scruffy Old Scientist. Tuesday, 3 May 2011. Have we passed the prediction peak? The Fate of Theory in the In-Silvo Era. The first turn-off, for many of us, was protein-protein interaction. Gosh! Suddenly our clever predictive contributions were made redundant- and by what? An ancient (5 years old! Wet lab technique coupled with robots. A perfect humiliation. Oh we did not like it! I call this in-silvo biology. That is to say in-silico biology. Domesticated to deal with data collected in-vivo.

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The Scruffy Old Scientist | cedricnotredame.blogspot.com Reviews
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The Scruffy Old Scientist. Tuesday, 3 May 2011. Have we passed the prediction peak? The Fate of Theory in the In-Silvo Era. The first turn-off, for many of us, was protein-protein interaction. Gosh! Suddenly our clever predictive contributions were made redundant- and by what? An ancient (5 years old! Wet lab technique coupled with robots. A perfect humiliation. Oh we did not like it! I call this in-silvo biology. That is to say in-silico biology. Domesticated to deal with data collected in-vivo.
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The Scruffy Old Scientist | cedricnotredame.blogspot.com Reviews

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The Scruffy Old Scientist. Tuesday, 3 May 2011. Have we passed the prediction peak? The Fate of Theory in the In-Silvo Era. The first turn-off, for many of us, was protein-protein interaction. Gosh! Suddenly our clever predictive contributions were made redundant- and by what? An ancient (5 years old! Wet lab technique coupled with robots. A perfect humiliation. Oh we did not like it! I call this in-silvo biology. That is to say in-silico biology. Domesticated to deal with data collected in-vivo.

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The Slow Bioinformatics Blog: Have we passed the prediction peak? The Fate of Theory in the In-Silvo Era

http://www.cedricnotredame.blogspot.com/2011/05/have-we-passed-prediction-peak-fate-of.html

The Slow Bioinformatics Blog. A lazy Blog - one entry every two years on average - about bioinformatics, methods and occasional background stories. Tuesday, 3 May 2011. Have we passed the prediction peak? The Fate of Theory in the In-Silvo Era. The first turn-off, for many of us, was protein-protein interaction. Gosh! Suddenly our clever predictive contributions were made redundant- and by what? An ancient (5 years old! I call this in-silvo biology. That is to say in-silico biology. The Fate of Th.

2

The Slow Bioinformatics Blog: May 2011

http://www.cedricnotredame.blogspot.com/2011_05_01_archive.html

The Slow Bioinformatics Blog. A lazy Blog - one entry every two years on average - about bioinformatics, methods and occasional background stories. Tuesday, 3 May 2011. Have we passed the prediction peak? The Fate of Theory in the In-Silvo Era. The first turn-off, for many of us, was protein-protein interaction. Gosh! Suddenly our clever predictive contributions were made redundant- and by what? An ancient (5 years old! I call this in-silvo biology. That is to say in-silico biology. The Fate of Th.

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T-COFFEE Multiple Sequence Alignment Server

http://tcoffee.crg.cat/apps/tcoffee/index.html

Combine popular aligners (M-Coffee). Combine popular aligners (M-Coffee). Combine popular aligners (M-Coffee). Homologous promoter regions (Pro-coffee). Evaluates your Alignment and outputs a Colored version indicating the local reliability. Cite. Evaluates Multiple Sequence Alignment using structural information with APDB and iRMSD. Cite. Allows fine-grained structural clustering of a given group of related protein domains. Evaluation of protein MSAs using a single 3D structure Cite. IGS lab., CNRS.

tcoffee.crg.cat tcoffee.crg.cat

T-COFFEE Multiple Sequence Alignment Server

http://tcoffee.crg.cat/apps/tcoffee

Combine popular aligners (M-Coffee). Combine popular aligners (M-Coffee). Combine popular aligners (M-Coffee). Homologous promoter regions (Pro-coffee). Evaluates your Alignment and outputs a Colored version indicating the local reliability. Cite. Evaluates Multiple Sequence Alignment using structural information with APDB and iRMSD. Cite. Allows fine-grained structural clustering of a given group of related protein domains. Evaluation of protein MSAs using a single 3D structure Cite. IGS lab., CNRS.

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T-COFFEE Multiple Sequence Alignment Server

http://tcoffee.vital-it.ch/apps/tcoffee

ExPASy: SIB Bioinformatics Resource Portal. T-Coffee A collection of tools for Computing, Evaluating and Manipulating Multiple Alignments of DNA, RNA, Protein Sequences and Structures. Aligns DNA, RNA or Proteins using the default T-Coffee Cite. Aligns DNA, RNA or Proteins by combining the output of popular aligners Cite. Aligns RNA sequences using predicted secondary structures Cite. Aligns protein sequences using structural information Cite. Aligns homologous promoter regions (new) Cite. Max-Planck Ins...

tcoffee.crg.cat tcoffee.crg.cat

T-COFFEE Multiple Sequence Alignment Server

http://tcoffee.crg.cat/apps/tcoffee/all.html

T-Coffee A collection of tools for Computing, Evaluating and Manipulating Multiple Alignments of DNA, RNA, Protein Sequences and Structures. Aligns DNA, RNA or Proteins using the default T-Coffee Cite. Aligns DNA, RNA or Proteins by combining the output of popular aligners Cite. Aligns RNA sequences using predicted secondary structures Cite. Aligns RNA sequences using tertiary structure. Aligns protein sequences using structural information Cite. Aligns homologous promoter regions. The Book Bioinformatic...

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The Scruffy Old Scientist

The Scruffy Old Scientist. Tuesday, 3 May 2011. Have we passed the prediction peak? The Fate of Theory in the In-Silvo Era. The first turn-off, for many of us, was protein-protein interaction. Gosh! Suddenly our clever predictive contributions were made redundant- and by what? An ancient (5 years old! Wet lab technique coupled with robots. A perfect humiliation. Oh we did not like it! I call this in-silvo biology. That is to say in-silico biology. Domesticated to deal with data collected in-vivo.

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