cisreg.cmmt.ubc.ca
Wasserman Lab Online ToolsWasserman Lab Online Tools
http://cisreg.cmmt.ubc.ca/
Wasserman Lab Online Tools
http://cisreg.cmmt.ubc.ca/
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Wasserman Lab Online Tools | cisreg.cmmt.ubc.ca Reviews
https://cisreg.cmmt.ubc.ca
Wasserman Lab Online Tools
cisreg.cmmt.ubc.ca
Wasserman Lab Alumni
http://cisreg.cmmt.ubc.ca/Alumni.html
Presentations from the Wasserman Group. Elodie Portales-Casamar, Ph.D. Neuroinformatics Core Manager, NeuroDevNet, NCE, Canada. Project and Outreach Coordinator, Life Sciences Institute, UBC, Canada. Margareta Faxen, PhD. Biosafety Officer, AZSHE, Sweden. Ekaterina (Katya) Nosova, PhD. Computational Biologist, Centre for Applied Neurogenetics, UBC, Canada. Virginie Bernard, PhD. Bioinformatics Manager, ICGex Bioinformatics team, Curie Institute, France. David Martin, PhD. Wynand Alkema, PhD. Program mana...
Welcome | TFe
http://cisreg.cmmt.ubc.ca/tfe
Sign in to TFe. Welcome to TFe, the transcription factor's best friend. About the TFe project. Example search terms: NFE2L2, Homo sapiens. GR, TCACTATGATTCAGCAACAAA, nuclear receptors. Or, go to a random article ». Here are some of our expert-curated articles. Browse all articles ». Brought to you by collaborators. And the Wasserman Lab. In Vancouver, Canada. Content subject to the Creative Commons Atribution-Share Alike 3.0 Unported License.
TFFM
http://cisreg.cmmt.ubc.ca/TFFM
The ORCA Toolkit
http://cisreg.cmmt.ubc.ca/ORCAtk
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cisRED: cis-regulatory element database
Databases of genome-wide regulatory module and element predictions. 26 Jul. 2007. 26 Sep. 2007. 18 Apr. 2007. 12 Feb. 2006. 18 Jul. 2008. Human Stat1 ChIP-seq peaks 1. 03 Apr. 2007. The cisRED database holds conserved sequence motifs identified by genome scale motif discovery, similarity, clustering, co-occurrence and coexpression calculations. Sequence inputs include low-coverage genome sequence. Data A Nucleic Acids Research article. Groups of 'similar' motifs. In promoter-based cisRED databases, seque...
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Wasserman Lab Online Tools
Welcome To The Wasserman Lab Website. About Wyeth Wasserman and the Wasserman Lab. Wasserman Lab Open Access Software. The source code for much of the newer Wasserman Lab software is available at GitHub. The ABC4DE web-interface allows for the analysis of sets of variants within a region of interest. For a given variant, the tool reports: 1) if it falls within a predicted regulatory region; 2) the predicted role for that region (promoter/enhancer); and 3) if the variant will alter a potential TFBSs.
Wasserman Lab Online Tools
Welcome To The Wasserman Lab Website. About Wyeth Wasserman and the Wasserman Lab. Wasserman Lab Open Access Software. The source code for much of the newer Wasserman Lab software is available at GitHub. An open-access tool for generating multiple different sequence backgrounds of comparable nucleotide composition relative to a set of input sequences. Transcription factor binding site detection using phylogenetic footprinting. The Gene Characterization Index. Transcription Factor Binding Profile Database.
www.cisreg.org
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Rest Lab, Department of Ecology and Evolution, Stony Brook University
