citrusgenomedb.org

Citrus Genome Database

Skip to main content. BIMS and Field Book. Search Gene and Transcripts. CGD and Mainlab activities at PAG 2018 (12/20/17). CGD User's Manual now available (9/14/17). Valencia genome added to CGD (7/28/17). 30 genomes aligned to C. clementina v1.0 genome (03/17/17). Supported by USDA NIFA National Research Support Project 10 (2014-2019), NSF Plant Genome Research Program Award (2016-2019) and USDA NIFA Specialty Crop Research Program (2009-2014).

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Citrus Genome Database | citrusgenomedb.org Reviews

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Skip to main content. BIMS and Field Book. Search Gene and Transcripts. CGD and Mainlab activities at PAG 2018 (12/20/17). CGD User's Manual now available (9/14/17). Valencia genome added to CGD (7/28/17). 30 genomes aligned to C. clementina v1.0 genome (03/17/17). Supported by USDA NIFA National Research Support Project 10 (2014-2019), NSF Plant Genome Research Program Award (2016-2019) and USDA NIFA Specialty Crop Research Program (2009-2014).

<META> KEYWORDS

1 toggle navigation

2 species

3 citrus sinensis

4 citrus clementina

5 poncirus trifoliata

6 citrus reticulata

7 citrus maxima

8 ca liberibacter asiaticus

9 ca liberibacter africanus

10 ca liberibacter americanus

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Citrus Genome Database | citrusgenomedb.org Reviews

https://citrusgenomedb.org

Skip to main content. BIMS and Field Book. Search Gene and Transcripts. CGD and Mainlab activities at PAG 2018 (12/20/17). CGD User's Manual now available (9/14/17). Valencia genome added to CGD (7/28/17). 30 genomes aligned to C. clementina v1.0 genome (03/17/17). Supported by USDA NIFA National Research Support Project 10 (2014-2019), NSF Plant Genome Research Program Award (2016-2019) and USDA NIFA Specialty Crop Research Program (2009-2014).

SUBDOMAINS

pathways.citrusgenomedb.org

Citrus Cyc Pathways

Citrus Genome DB Home. Search genes, proteins or RNAs. Google search of this site. Browse Enzyme Commission Ontology. Welcome to the CitrusCyc Pathways Database. Part of the Citrus Genome Database. The following Cyc databases are available for browsing. Pathways were constructed using gene sequences from the C. clementina v1.0 genome assembly. Pathways were constructed using gene sequences from the C. sinensis v1.0 genome assembly. The pathways provided here for both Citrus clementina.

INTERNAL PAGES

citrusgenomedb.org

1

Database Overview | Citrus Genome Database

https://www.citrusgenomedb.org/node/656262

About Citrus Genome Database. C clementina genome v1.0. C clementina genome v0.9. C sinensis genome v1.0. Tree Genetics and Genomes Journal Data Submission. Markers - 3,427. Genetic markers consisting of 1514 SNPs, 914 SSRs, 422 RAPD,. 246 SRAPs, 88 SCARs, 77 IRAP, 55 Indels,. Linkage maps with 3,334. Loci consisting of 50 genetic linkage maps covering all nine chromosomes and 1 association map. QTL loci from 8. Data from 23 measurements using 3 markers for 3 species. Citrus trifoliata unigene V1. GBrows...

2

Citrus sinensis genome v1.0 (JGI) | Citrus Genome Database

https://www.citrusgenomedb.org/species/sinensis/genome1.0

About Citrus Genome Database. C clementina genome v1.0. C clementina genome v0.9. C sinensis genome v1.0. Tree Genetics and Genomes Journal Data Submission. Citrus sinensis genome v1.0 (JGI). Citrus sinensis genome v1.0 (JGI). Performed by JGI (v1.0). JGI Citrus sinensis assembly/annotation v1.0 (154). The following text comes from phytozome.org:. Genome Size / Loci. We aligned the sweet orange EST sequences using Brian Haass PASA pipeline which aligns ESTs to the best place in the genome via gmap, then ...

3

Tools | Citrus Genome Database

https://www.citrusgenomedb.org/tools

About Citrus Genome Database. C clementina genome v1.0. C clementina genome v0.9. C sinensis genome v1.0. Tree Genetics and Genomes Journal Data Submission. Supported by grants from the USDA NIFA Specialty Crop Research Program (2009-2014) and USDA NIFA National Research Support Project 10 (2014-2019).

4

Citrus sinensis Unigene version 1.0 (Csv1) | Citrus Genome Database

https://www.citrusgenomedb.org/species/sinensis/unigene1.0

About Citrus Genome Database. C clementina genome v1.0. C clementina genome v0.9. C sinensis genome v1.0. Tree Genetics and Genomes Journal Data Submission. Citrus sinensis Unigene version 1.0 (Csv1). Citrus sinensis Unigene version 1.0 (Csv1). Citrus sinensis ESTs 053010.fasta. This Unigene was constructed from 206,813 ESTs obtained from Genbank. The bioinformatic methods used to produce this Unigene can be found here. Number of reads: 206,813. Number of contigs: 13,856. Ace file from CAP3 assembly.

5

CGD Tutorials | Citrus Genome Database

https://www.citrusgenomedb.org/tutorials

About Citrus Genome Database. C clementina genome v1.0. C clementina genome v0.9. C sinensis genome v1.0. Tree Genetics and Genomes Journal Data Submission. Site Overview: An explanation of the features available through the Citrus Genome Database and how to effectively use the website. This tutorial gives a basic explanation of. All the features of GBrowse and how to use it through citrus genome database.

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bioinfo.wsu.edu

The Main Lab Members | Mainlab Bioinformatics

https://www.bioinfo.wsu.edu/node/379

Analyzing and integrating genomic and genetic data for application in plant agricultural systems. Genome Database for Rosaceae. Genome Database for Vaccinium. The Cool Season Food Legume Database. The Main Lab Members. The entire Main Lab, May 2014. Focusing on horticultural and other crop species, Dorrie and her lab collaborate with many other researchers worldwide to develop bioinformatic tools to further the field of fruit and plant systems biology. See Click here for more information about Dorrie.

bioinfo.wsu.edu

Facilities | Mainlab Bioinformatics

https://www.bioinfo.wsu.edu/node/154

Analyzing and integrating genomic and genetic data for application in plant agricultural systems. Genome Database for Rosaceae. Genome Database for Vaccinium. The Cool Season Food Legume Database. Over 3000 square feet of dedicated office and conferencing space. Bull; Updated computational workstations. Bull; Modern furniture with private cubicles. Bull; 56 node, dual 2.2 GHz processor, 2 GB RAM per node, High Performance Computing Cluster. Bull; Modern Gigabit Networking infrastructure.

bioinfo.wsu.edu

Coordinating Fruit and Forestry Tree Crop Genome Database Development (03/21/14) | Mainlab Bioinformatics

https://www.bioinfo.wsu.edu/node/991

Analyzing and integrating genomic and genetic data for application in plant agricultural systems. Genome Database for Rosaceae. Genome Database for Vaccinium. The Cool Season Food Legume Database. Coordinating Fruit and Forestry Tree Crop Genome Database Development (03/21/14). Researchers working on fruit and forestry tree genome databases meet at the University of Kentucky Forest Health and Education Research Center to coordinate research efforts.

bioinfo.wsu.edu

User account | Mainlab Bioinformatics

https://www.bioinfo.wsu.edu/user

Analyzing and integrating genomic and genetic data for application in plant agricultural systems. Genome Database for Rosaceae. Genome Database for Vaccinium. The Cool Season Food Legume Database. Enter your Mainlab Bioinformatics username. Enter the password that accompanies your username.

bioinfo.wsu.edu

CottonGen database presented at PAG 2014 (01/13/14) | Mainlab Bioinformatics

https://www.bioinfo.wsu.edu/node/990

Analyzing and integrating genomic and genetic data for application in plant agricultural systems. Genome Database for Rosaceae. Genome Database for Vaccinium. The Cool Season Food Legume Database. CottonGen database presented at PAG 2014 (01/13/14). CottonGen database presented at PAG XXI (01/13/14).

bioinfo.wsu.edu

The Cool Season Food Legume Genome Database presented at NAPIA (10/31/13) | Mainlab Bioinformatics

https://www.bioinfo.wsu.edu/node/448

Analyzing and integrating genomic and genetic data for application in plant agricultural systems. Genome Database for Rosaceae. Genome Database for Vaccinium. The Cool Season Food Legume Database. The Cool Season Food Legume Genome Database presented at NAPIA (10/31/13). The Cool Season Food Legume Genome Database. Presented at NAPIA 2013.

bioinfo.wsu.edu

Mailing lists | Mainlab Bioinformatics

https://www.bioinfo.wsu.edu/mailing_lists

Analyzing and integrating genomic and genetic data for application in plant agricultural systems. Genome Database for Rosaceae. Genome Database for Vaccinium. The Cool Season Food Legume Database. Subscribe or unsubscribe to a mailing list by entering your email address and selecting the checkbox for the mailing list. You will receive an email with further instructions to complete the process. Your Email address: *. Cacao Genome Database (CGD-LIST). (The mailing list is available for all types of com...

bioinfo.wsu.edu

Tripal v2.0 Released (02/24/14) | Mainlab Bioinformatics

https://www.bioinfo.wsu.edu/node/992

Analyzing and integrating genomic and genetic data for application in plant agricultural systems. Genome Database for Rosaceae. Genome Database for Vaccinium. The Cool Season Food Legume Database. Tripal v2.0 Released (02/24/14). Tripal v2.0 Released (www.tripal.org.

bioinfo.wsu.edu

Projects | Mainlab Bioinformatics

https://www.bioinfo.wsu.edu/node/149

Analyzing and integrating genomic and genetic data for application in plant agricultural systems. Genome Database for Rosaceae. Genome Database for Vaccinium. The Cool Season Food Legume Database. Development of a web accessible. Genome Database for Rosaceae (GDR). The Cacao Genome Sequencing Project and Database Development. Development of the Citrus Genome Databases. Development of GenSAS - A Genome Sequence Annotation Server. Identification of powdery mildew genes in Rosaceae.

tripal.info

Sites Using Tripal | Tripal

http://www.tripal.info/sites_using_tripal

Skip to main content. The following is a list of some of the sites that have adopted Tripal. If you would like your site listed please let us know by joining the Tripal mailing list. And sending a request. Http:/ banana-genome.cirad.fr/. Http:/ www.cacaogenomedb.org/. Http:/ www.citrusgenomedb.org/. Cool Season Food Legume Database. Http:/ www.coolseasonfoodlegume.org. Http:/ www.cottongen.org/. Http:/ www.fagaceae.org/. Http:/ sysbio.genome.clemson.edu/. Genome Database for Rosaceae.

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CITRUS COUNTY GENEALOGICAL SOCIETY - HOME

CITRUS COUNTY GENEALOGICAL SOCIETY. Last Membership Meeting Minutes. Officers and Committee Chairpersons. Website of The Citrus County Genealogical Society. We encourage anyone in the Citrus County, Florida area to come and join us. View information on upcoming programs and speakers, below.- -. View directions to our meeting location. Look into becoming a member. Ldquo;50 Websites Every Genealogist Should Know”. 8203; . April 10 - “Using Historical Maps in your Genealogy Research”. 8203; . June 12 &n...

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CITRUS GENESIS | Nuevas variedades de cítricos

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citrusgenome.ucr.edu

International Citrus Genomics Consortium

International Citrus Genomics Consortium. Genome / Genomics Consortium. JGI - Why Sequence Sweet Orange? Http:/ www.jgi.doe.gov/sequencing/why/3128.html. To obtain JGI sweet orange genomic sequences corresponding to a citrus ESTs:. 1) Do a BLAST search at the server : http:/ harvest-blast.org/. In the Database box at the top of the page, select "JGI Citrus". This will return the BLAST hits. 2) To fetch the actual sequences, go to http:/ harvest-web.org/utilmenu.wc? With synteny to Arabidopsis.

citrusgenomedb.org

Citrus Genome Database

Skip to main content. BIMS and Field Book. Search Gene and Transcripts. CGD and Mainlab activities at PAG 2018 (12/20/17). CGD User's Manual now available (9/14/17). Valencia genome added to CGD (7/28/17). 30 genomes aligned to C. clementina v1.0 genome (03/17/17). Supported by USDA NIFA National Research Support Project 10 (2014-2019), NSF Plant Genome Research Program Award (2016-2019) and USDA NIFA Specialty Crop Research Program (2009-2014).

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Citrus Gastroenterology, PA - Citrus County Gastroenterology - Endoscopy, Inverness

Thank you for visiting! When you and your doctor seek comprehensive care and skill for a digestive or liver disorder, you’ll find it at Citrus Gastroenterology, PA. We have been providing diagnostic and therapeutic management of digestive disease and liver disorders since 1981 with the most advanced diagnostic and treatment methods for colorectal cancer. Heartburn and reflux disease. Change in bowel habits. And liver and gallbladder problems. Procedures offered in-office and off-site:.

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Citrus Gift Pack - Your Daily Dose Of Sweet Inspiration

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Citrus Giordano | The Chronicles of Ms Citrus Giordano

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