COGEMIR.TIGEM.IT

.:: CoGemiR - Comparative Genomic microRNA database ::.

Comparative Genomics Analysis of MicroRNA. CoGemiR: a comparative genomics microRNA database. Vincenza Maselli, Diego Di Bernardo and Sandro Banfi. BMC Genomics 2008, 9:457 (6 October 2008). Http:/ www.biomedcentral.com/1471-2164/9/457. Type your keyword (e.g. hsa-mir-204 or mir-211). Paste Your MicroRNA List (max 50 microRNAs). (Click here. If you want submit more than 50 microRNAs, please upload a file. Submit a file (click here. For information about the file format). Release v1.2b June 2008.

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.:: CoGemiR - Comparative Genomic microRNA database ::. | cogemir.tigem.it Reviews

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Comparative Genomics Analysis of MicroRNA. CoGemiR: a comparative genomics microRNA database. Vincenza Maselli, Diego Di Bernardo and Sandro Banfi. BMC Genomics 2008, 9:457 (6 October 2008). Http:/ www.biomedcentral.com/1471-2164/9/457. Type your keyword (e.g. hsa-mir-204 or mir-211). Paste Your MicroRNA List (max 50 microRNAs). (Click here. If you want submit more than 50 microRNAs, please upload a file. Submit a file (click here. For information about the file format). Release v1.2b June 2008.

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.:: CoGemiR - Comparative Genomic microRNA database ::. | cogemir.tigem.it Reviews

https://cogemir.tigem.it

Comparative Genomics Analysis of MicroRNA. CoGemiR: a comparative genomics microRNA database. Vincenza Maselli, Diego Di Bernardo and Sandro Banfi. BMC Genomics 2008, 9:457 (6 October 2008). Http:/ www.biomedcentral.com/1471-2164/9/457. Type your keyword (e.g. hsa-mir-204 or mir-211). Paste Your MicroRNA List (max 50 microRNAs). (Click here. If you want submit more than 50 microRNAs, please upload a file. Submit a file (click here. For information about the file format). Release v1.2b June 2008.

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.:: CoGemiR - Comparative Genomic microRNA database ::.

http://cogemir.tigem.it/htdocs/index.html

Comparative Genomics Analysis of MicroRNA. CoGemiR: a comparative genomics microRNA database. Vincenza Maselli, Diego Di Bernardo and Sandro Banfi. BMC Genomics 2008, 9:457 (6 October 2008). Http:/ www.biomedcentral.com/1471-2164/9/457. Type your keyword (e.g. hsa-mir-204 or mir-211). Paste Your MicroRNA List (max 50 microRNAs). (Click here. If you want submit more than 50 microRNAs, please upload a file. Submit a file (click here. For information about the file format). Release v1.2b June 2008.

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.:: Help ::.

http://cogemir.tigem.it/htdocs/help.html

In the home page there is the possibility to sumbit a quick search using as keyword the name of the microRNA (e.g. 'hsa-mir-211' or 'mir-211'),. Writing a list of microRNAs in a text area (example). Or uploading a file with a list of microRNA in the appropriate format. With a list of microRNA. The query mask allows the user to perform more complex queries. In the advanced search all the options are available. In the main search page the query became more and more specific, depending on the user's choice.

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hoctar1.0.tigem.it

HOCTAR (Host gene Opposite Correlated TARgets)

http://hoctar1.0.tigem.it/index.php

The HOCTAR (Host gene Opposite Correlated TARgets) tool is a new procedure to improve the prediction of miRNA targets. The HOCTAR procedure is based on the integration of expression profiling and sequence-based miRNA target recognition softwares. HOCTAR also provides tentative assignments of miRNA function based on Gene Ontology analyses of their predicted targets. HOCTAR data can be queried by using different key terms such microRNA names or Target Gene symbols.

hoctar.tigem.it

HOCTAR (Host gene Opposite Correlated TARgets)

http://hoctar.tigem.it/help.php

Version 2.0 - 2010. Website Created and Manteined by Giampiero Lago.

hoctar.tigem.it

HOCTAR (Host gene Opposite Correlated TARgets)

http://hoctar.tigem.it/index.php

Version 2.0 - 2010. Gennarino VA, Sardiello M, Mutarelli M, Dharmalingam G, Maselli V, Lago G, Banfi S. HOCTAR database: A unique resource for microRNA target prediction. Gennarino VA, Sardiello M, Avellino R, Meola N, Maselli V, Anand S, Cutillo L, Ballabio A, Banfi S. MicroRNA target prediction by expression analysis of host genes. 2009 Mar 19:481-490; Published in Advance December 16, 2008. HOCTAR 1.0 March 2009. Website Created and Manteined by Giampiero Lago.

bioinformatics.tigem.it

Databases — Bioinformatics Site

http://bioinformatics.tigem.it/database-and-software/databases

Only in current section. This is SunRain Plone Theme. Transfac is a database on the features of Transcription Factors. It is a database on eukaryotic cis-acting regulatory DNA elements and trans-acting factors. On this data base it is possible to find the binding sites sequences of the trascription factor of your interest. Download subscription, online access not available). Human Gene Mutation Database (HGMD). RP genes expression atlas database. Comparative Genomic microRNA database.

bio123.com.cn

microRNA 、 microRNA target gene预测网站和LinCRNA 数据库

http://www.bio123.com.cn/htmls/RNA

MicroRNA 、 microRNA target gene预测网站. A bioinformatic web interface able to custom analyze deep sequencing data to study miRNA variants or isomiRs. From Genetic Causes of Disease Group, Genes and Disease Program, Centre for Genomic Regulation (CRG), Pompeu Fabra University, Barcelona, Catalonia, Spain. DIANA-microT, MicroInspector, miRanda, MirTarget2, miTarget, NBmiRTar, PicTar, PITA, RNA22, RNAhybrid, and TargetScan/TargertScanS. Mfold, RNAfold, RNAcofold.

bio123.com.cn

microRNA 、 microRNA target gene预测网站和LinCRNA 数据库

http://www.bio123.com.cn/htmls/RNA/index.html

MicroRNA 、 microRNA target gene预测网站. A bioinformatic web interface able to custom analyze deep sequencing data to study miRNA variants or isomiRs. From Genetic Causes of Disease Group, Genes and Disease Program, Centre for Genomic Regulation (CRG), Pompeu Fabra University, Barcelona, Catalonia, Spain. DIANA-microT, MicroInspector, miRanda, MirTarget2, miTarget, NBmiRTar, PicTar, PITA, RNA22, RNAhybrid, and TargetScan/TargertScanS. Mfold, RNAfold, RNAcofold.

hoctar1.0.tigem.it

HOCTAR (Host gene Opposite Correlated TARgets)

http://hoctar1.0.tigem.it/help.php

For Scientific Informations - Suggestions. For Website Problems - Suggestions. Website Created and Manteined by Giampiero Lago.

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.:: CoGemiR - Comparative Genomic microRNA database ::.

Comparative Genomics Analysis of MicroRNA. CoGemiR: a comparative genomics microRNA database. Vincenza Maselli, Diego Di Bernardo and Sandro Banfi. BMC Genomics 2008, 9:457 (6 October 2008). Http:/ www.biomedcentral.com/1471-2164/9/457. Type your keyword (e.g. hsa-mir-204 or mir-211). Paste Your MicroRNA List (max 50 microRNAs). (Click here. If you want submit more than 50 microRNAs, please upload a file. Submit a file (click here. For information about the file format). Release v1.2b June 2008.

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