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combine-lab.github.io

COMBINE Lab

Website for the Computational Biology and Network Evolution Lab at Stony Brook University

http://combine-lab.github.io/

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COMBINE Lab | combine-lab.github.io Reviews

https://combine-lab.github.io

Website for the Computational Biology and Network Evolution Lab at Stony Brook University

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combine-lab.github.io combine-lab.github.io
1

COMBINE-Lab at ISMB 2016

http://combine-lab.github.io/2016-07-20-ismb

COMBINE-Lab at ISMB 2016. Posted on July 20, 2016. Appeared at ISMB 2016 as part of the proceedings track. Avi gave a very nice talk to a full audience, explaining the many benefits of quasi-mapping! The RapMap software is freely-available here. Larr; Previous Post. Next Post →. Rob Patro • 2016 • COMBINE-lab.github.io.

2

Software

http://combine-lab.github.io/software

In addition to papers, we consider high-quality, open-source software to be one of the primary scientific outputs of our work. Here you will find links to our lab’s software and a brief description of each tool. Salmon is an accurate, fast and. Tool for transcript abundance estimation using RNA-seq data. It achieves its combination of speed and accuracy through a novel approach to read mapping (quasi-mapping) and a dual-phase inference algorithm. Rob Patro • 2016 • COMBINE-lab.github.io.

3

Upcoming Talks

http://combine-lab.github.io/2016-03-09-upcoming-talks

Posted on March 9, 2016. Rob will be giving a number of talks in the next month. If you’re around and available, ask for details! March 21, 2016: Weill Cornell Medical School. April 04, 2016: Personal Genome Diagnostics. April 05, 2016: Johns Hopkins University. Larr; Previous Post. Next Post →. Rob Patro • 2016 • COMBINE-lab.github.io.

4

Welcome

http://combine-lab.github.io/2016-02-24-welcome

Posted on February 24, 2016. Welcome to the homepage of the Computational Biology and Network Evolution group at Stony Brook University! Next Post →. Rob Patro • 2016 • COMBINE-lab.github.io.

5

RecentAndUpcoming

http://combine-lab.github.io/2016-09-16-recentandupcoming

Posted on September 16, 2016. Recent News and Upcoming events. Rob will be giving a talk about Salmon. On Sept. 30, 2016 at UW Madison. Rob is teaching CSE 549: Introduction to Computational Biology. Larr; Previous Post. Rob Patro • 2016 • COMBINE-lab.github.io.

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LINKS TO THIS WEBSITE

laufercenter.stonybrook.edu laufercenter.stonybrook.edu

Faculty at the Laufer Center

http://laufercenter.stonybrook.edu/people/faculty

CHE/PHY 559 / AMS 537. Who's Who at the Laufer Center. Is interested in the physics of how proteins fold; the microscopic origins of the unusual physical properties of water; the foundations and applications of variational entropy-based principles in statistical physics; and how the laws of physics constrain and enable the biological properties and evolution of cells. Ken is a Distinguished Professor of Physics and Chemistry at Stony Brook. ( Video. Researches the logic and control of cell growth and cel...

laufercenter.org laufercenter.org

Faculty at the Laufer Center

http://www.laufercenter.org/people/faculty

CHE/PHY 559 / AMS 537. Who's Who at the Laufer Center. Is interested in the physics of how proteins fold; the microscopic origins of the unusual physical properties of water; the foundations and applications of variational entropy-based principles in statistical physics; and how the laws of physics constrain and enable the biological properties and evolution of cells. Ken is a Distinguished Professor of Physics and Chemistry at Stony Brook. ( Video. Researches the logic and control of cell growth and cel...

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COMBINE Lab

Website for the Computational Biology and Network Evolution Lab at Stony Brook University. Posted on September 16, 2016. Recent News & Upcoming events Rob will be giving a talk about Salmon on Sept. 30, 2016 at UW Madison. Rob is teaching CSE 549: Introduction to Computational Biology this semester. [Read More]. COMBINE-Lab at ISMB 2016. Posted on July 20, 2016. The RapMap software is freely-available here. [Read More]. Posted on March 9, 2016. Posted on February 24, 2016.

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