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COMPGENOMICS2011.BIOLOGY.GATECH.EDU

Compgenomics 2011

The science of genomics involves the intersection of experimentation and computation. Computers are quite obviously required to handle the massive amount of data produced by genome sequencing projects. More importantly however, genome sequencing efforts yield ‘information’ alone, which can only be converted into ‘knowledge’ through the use of computers. In this class, the students will convert raw genomic information ( i.e. 1 - genome assembly. 2 - gene prediction. 3 - functional annotation. Programs and...

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Compgenomics 2011 | compgenomics2011.biology.gatech.edu Reviews
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The science of genomics involves the intersection of experimentation and computation. Computers are quite obviously required to handle the massive amount of data produced by genome sequencing projects. More importantly however, genome sequencing efforts yield ‘information’ alone, which can only be converted into ‘knowledge’ through the use of computers. In this class, the students will convert raw genomic information ( i.e. 1 - genome assembly. 2 - gene prediction. 3 - functional annotation. Programs and...
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1 Main Page
2 Lectures
3 Exercises
4 Profiles
5 Literature/Papers
6 Comparative Genomics Group
7 Genome Assembly Group
8 Gene Prediction Group
9 Genome Browser Group
10 Functional Annotation Group
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main page,from compgenomics 2011,jump to navigation,contents,computational genomics,course materials,guest lecturers,working groups,course summary,evaluation,ta andy conley,class syllabus,lectures,exercises,literature/papers,profiles,protocols,resources
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Compgenomics 2011 | compgenomics2011.biology.gatech.edu Reviews

https://compgenomics2011.biology.gatech.edu

The science of genomics involves the intersection of experimentation and computation. Computers are quite obviously required to handle the massive amount of data produced by genome sequencing projects. More importantly however, genome sequencing efforts yield ‘information’ alone, which can only be converted into ‘knowledge’ through the use of computers. In this class, the students will convert raw genomic information ( i.e. 1 - genome assembly. 2 - gene prediction. 3 - functional annotation. Programs and...

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compgenomics2011.biology.gatech.edu compgenomics2011.biology.gatech.edu
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Changes related to "Main Page" - Compgenomics 2011

http://compgenomics2011.biology.gatech.edu/index.php/Special:RecentChangesLinked/Main_Page

Changes related to Main Page. This is a list of changes made recently to pages linked from a specified page (or to members of a specified category). Pages on your watchlist. 32; 100. 32; 250. 32; 500. Changes in last 1. 32; 3. 32; 7. 32; 14. 32; 30. Minor edits Show. Bots Hide. Anonymous users Hide. Logged-in users Hide. Show new changes starting from 20:47, 22 August 2016. Show changes to pages linked to the given page instead. No changes on linked pages during the given period.

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Genome Browser Group - Compgenomics 2011

http://compgenomics2011.biology.gatech.edu/index.php/Genome_Browser_Group

Generic Feature Format version 3 (GFF3). Genome Browser Group Members. Where you can find most of the how to's. Information on data collected from the other groups. Tools and Layout ideas from the other groups. It is browser's job to develop a resource that aggregates the data produced during the process of this project. This year we have been given the task of integrating 5 strains of Haemophilus haemolyticus. And one strain of Haemophilus influenzae. We instead have the chance to start anew. A joint pr...

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Special pages - Compgenomics 2011

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Pages with the fewest revisions. Pages without language links. All pages with prefix. Login / sign up. Log in / create account. Blocked IP addresses and usernames. Recent changes and logs. Gallery of new files. Media reports and uploads. Search for duplicate files. Wiki data and tools. Pages with the most categories. Pages with the most revisions. Retrieved from " http:/ compgenomics2011.biology.gatech.edu/index.php/Special:SpecialPages.

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Lectures - Compgenomics 2011

http://compgenomics2011.biology.gatech.edu/index.php/Lectures

Lectures Given in Class. Jordan Lecture 1 - Intro to Compgenomics. Conley Lecture 1 - Intro to Compgenomics. Leonard Mayer - Intro to Haemophilus. Andrey Kislyuk - Intro to Genome Assembly. Assembly Presentation #1: background&strategy. Assembly Presentation #2: preliminary results&lab. Gene Prediction Presentation: Background and Strategy. Gene Prediction Presentation: Preliminary Data. Prediction Lab Exercise 2. Functional Annotation Presentation 1. Gene Prediction Presentation: Final Results.

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Talk:Main Page - Compgenomics 2011

http://compgenomics2011.biology.gatech.edu/index.php/Talk:Main_Page

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Compgenomics

http://www.compgenomics.biology.gatech.edu/index.php/Main_Page

Jordan Lab main site. We are a Computational Biology and Bioinformatics laboratory in the School of Biology at the Georgia Institute of Technology. Our group does research and development on:. Transposable Elements, Epigenomics and Gene Regulation. The influence of transposable elements (TEs) on the structure, function and evolution of eukaryotic genomes. Understanding the relationship between TEs, chromatin structure and gene expression dynamics. Next Generation Sequence Analysis. Retrieved from " http:...

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OTHER SITES

compgenomics.lab.uconn.edu compgenomics.lab.uconn.edu

Home | Plant Computational Genomics Lab - Jill Wegrzyn

Department of Ecology and Evolutionary Biology. Plant Computational Genomics Lab – Jill Wegrzyn. We are recruiting MS and PhD students for Fall 2017. Apply here! January 5, 2016. Sugar pine genome in the news! The 31Gbp sugar pine genome, the largest sequenced to date, has been released to the public. December 21, 2015. USDA NIFA Proposal Funded! The USDA NIFA proposal led by Fikret Isik at NCSU will develop genotyping resources for loblolly pine and sugar pine to aid in genomic selection. July 9, 2015.

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CGP

UC Davis Genome Center.

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Amos Tanay's Group

Amos Tanay's Group. We are part of the Systems Biology community. At the Weizmann Institute. With affiliations to the Department of Computer Science and Applied Mathematics. And the Department of Biological Regulation. The group is involved in multiple efforts aimed at understanding the physical organization of chromosomes using Chromosome Conformation Capture (3C) and several of its high throughput implementations ( Hi-C. Published: DNA methylation turnover and epigenetic memory.

compgenomics2009.biology.gatech.edu compgenomics2009.biology.gatech.edu

Main Page - Compgenomics 2009

The science of genomics involves the intersection of experimentation and computation. Computers are quite obviously required to handle the massive amount of data produced by genome sequencing projects. More importantly however, genome sequencing efforts yield ‘information’ alone, which can only be converted into ‘knowledge’ through the use of computers. In this class, the students will convert raw genomic information ( i.e. And 5-production of a genome browser. Programs and/or databases) to use, how to i...

compgenomics2010.biology.gatech.edu compgenomics2010.biology.gatech.edu

Compgenomics2010

The science of genomics involves the intersection of experimentation and computation. Computers are quite obviously required to handle the massive amount of data produced by genome sequencing projects. More importantly however, genome sequencing efforts yield ‘information’ alone, which can only be converted into ‘knowledge’ through the use of computers. In this class, the students will convert raw genomic information ( i.e. And 5-production of a genome browser. Programs and/or databases) to use, how to i...

compgenomics2011.biology.gatech.edu compgenomics2011.biology.gatech.edu

Compgenomics 2011

The science of genomics involves the intersection of experimentation and computation. Computers are quite obviously required to handle the massive amount of data produced by genome sequencing projects. More importantly however, genome sequencing efforts yield ‘information’ alone, which can only be converted into ‘knowledge’ through the use of computers. In this class, the students will convert raw genomic information ( i.e. 1 - genome assembly. 2 - gene prediction. 3 - functional annotation. Programs and...

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Computational Geometry - Home

Project Hosting for Open Source Software. By clicking Delete, all history, comments and attachments for this page will be deleted and cannot be restored. Change History (all pages). A library of Computational Geometry algorithms such as convex hulls, Voronoi diagrams, line intersections, triangulations, and more; written in C#. Convex Hull 2D algorithm. Basic shape library (point, line, polygon). Binary Heap (Max, Min planned). Line sweep algorithm for detecting line segment intersections.