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comments on Andrew Dalke's writings

Comments on Andrew Dalke's writings. Wednesday, August 3, 2016. Reading ASCII file in Python3.5 is 2-3x faster as bytes than string. I wrote an essay which compared the read performance in Python3.5 between bytes and the Unicode text options 'newline' and 'encoding. I concluded that I couldn't get the Unicode string performance to within a factor of 2 of the binary byte performance, so chemfp will be working with bytes, not strings. This is the place to leave comments about that post. Sunday, July 6, 2014.

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Comments on Andrew Dalke's writings. Wednesday, August 3, 2016. Reading ASCII file in Python3.5 is 2-3x faster as bytes than string. I wrote an essay which compared the read performance in Python3.5 between bytes and the Unicode text options 'newline' and 'encoding. I concluded that I couldn't get the Unicode string performance to within a factor of 2 of the binary byte performance, so chemfp will be working with bytes, not strings. This is the place to leave comments about that post. Sunday, July 6, 2014.

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comments on Andrew Dalke's writings | dalkescientific.blogspot.com Reviews

https://dalkescientific.blogspot.com

Comments on Andrew Dalke's writings. Wednesday, August 3, 2016. Reading ASCII file in Python3.5 is 2-3x faster as bytes than string. I wrote an essay which compared the read performance in Python3.5 between bytes and the Unicode text options 'newline' and 'encoding. I concluded that I couldn't get the Unicode string performance to within a factor of 2 of the binary byte performance, so chemfp will be working with bytes, not strings. This is the place to leave comments about that post. Sunday, July 6, 2014.

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dalkescientific.blogspot.com

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comments on Andrew Dalke's writings: June 2014

http://dalkescientific.blogspot.com/2014_06_01_archive.html

Comments on Andrew Dalke's writings. Wednesday, June 18, 2014. I wrote an essay describing my current understanding of the ideas of Calvin Mooers. Regarding chemical database search, and how they affected the early decades of cheminformatics. This is necessarily incomplete as the details took place over 50 years ago and I don't have access to some of the critical records. If you have comments or questions, here's the place to voice them. Subscribe to: Posts (Atom). View my complete profile.

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comments on Andrew Dalke's writings: November 2011

http://dalkescientific.blogspot.com/2011_11_01_archive.html

Comments on Andrew Dalke's writings. Wednesday, November 9, 2011. My mini-project to make a new backend to f2py which generates a ctypes-based extension module for Python. The goal is to see if that is a viable path for PyPy support of the existing shared libraries already wrapped by f2py. I think it is. Feel free to comment! Subscribe to: Posts (Atom). I am an American living in Göteborg, Sweden. I make my living writing software for computational chemistry and biology, usually in Python.

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comments on Andrew Dalke's writings: July 2014

http://dalkescientific.blogspot.com/2014_07_01_archive.html

Comments on Andrew Dalke's writings. Sunday, July 6, 2014. The origin of the connection table. I've been trying to understand the origin of the connection table, and the origin of the term "connection table." The full details are in my essay " The origin of the connection table. I then tried to figure out why people say that Wheland is the creator of the connection table, but that's unresolved. If you have comments about that essay, leave them here. Subscribe to: Posts (Atom). View my complete profile.

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comments on Andrew Dalke's writings: January 2010

http://dalkescientific.blogspot.com/2010_01_01_archive.html

Comments on Andrew Dalke's writings. Friday, January 29, 2010. This is a place to comment about my post " Project hosting options? Sunday, January 10, 2010. I proposed a fingerprint file format. For small molecule chemistry. Here's the place to leave comments or suggestions. Sunday, January 3, 2010. I think there's a problem in how several web browsers fail to escape the filenames for Content-Disposition. Subscribe to: Posts (Atom). View my complete profile.

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comments on Andrew Dalke's writings: December 2010

http://dalkescientific.blogspot.com/2010_12_01_archive.html

Comments on Andrew Dalke's writings. Tuesday, December 28, 2010. Reordering SMILES atom order. I wrote a rather long essay about how to generate SMILES strings where the atoms are in arbitrary/user-defined order. The first two implementations use RDKit but in the last I couldn't work around an RDKit bug so I switched over to OpenBabel. (Edit: Greg commented here that the bug has been fixed in version control and will out as part of the Q4 2010 release.). Subscribe to: Posts (Atom).

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dalkescientific.blogspot.com

comments on Andrew Dalke's writings

Comments on Andrew Dalke's writings. Wednesday, August 3, 2016. Reading ASCII file in Python3.5 is 2-3x faster as bytes than string. I wrote an essay which compared the read performance in Python3.5 between bytes and the Unicode text options 'newline' and 'encoding. I concluded that I couldn't get the Unicode string performance to within a factor of 2 of the binary byte performance, so chemfp will be working with bytes, not strings. This is the place to leave comments about that post. Sunday, July 6, 2014.

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