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Ardell Lab @ UC Merced - Studying how genomes express themselves

Ardell Lab @ UC Merced. Studying how genomes express themselves. The Ardell lab is looking for masters and doctoral students to join the lab. Of our Research Interests. 2009 Ardell Lab @ UC Merced. Built on WP Framework. Mdash; Powered by WordPress.

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Ardell Lab @ UC Merced - Studying how genomes express themselves | davidardell.org Reviews

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Ardell Lab @ UC Merced. Studying how genomes express themselves. The Ardell lab is looking for masters and doctoral students to join the lab. Of our Research Interests. 2009 Ardell Lab @ UC Merced. Built on WP Framework. Mdash; Powered by WordPress.

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Join » Ardell Lab @ UC Merced - Studying how genomes express themselves

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Ardell Lab @ UC Merced. Studying how genomes express themselves. Join the Ardell Group! The key attributes I seek in students are good coders with data science skills, self-driven, motivated, interdisciplinary thinkers, good communicators, with passion for basic questions involving information and codes in molecular, cellular and organismal systems. I have funded research projects in the following topics:. Bioinformatics of the structure and function of tRNAs and their cleavage products in eukaryotes.

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Code » Ardell Lab @ UC Merced - Studying how genomes express themselves

http://davidardell.org/software

Ardell Lab @ UC Merced. Studying how genomes express themselves. Free Open-Source Software from the Ardell Lab. Genetic Code-Message Coevolution Models in Python. A tRNA function classifier. Multiple-testing corrections for significance testing in sliding-window analysis of sequence polymorphism statistics. A Perl module (on CPAN). For computing descriptive statistics of weighted variates, including. Weighted mean, variance, median, percentile, and others. Has an efficient. 2009 Ardell Lab @ UC Merced.

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TFAM » Ardell Lab @ UC Merced - Studying how genomes express themselves

http://davidardell.org/software/tfam

Ardell Lab @ UC Merced. Studying how genomes express themselves. TFAM is a BioPerl-based tRNA function classifier that uses sequence profile models to classify the function of unknown query tRNAs. It is useful for classifying initiator tRNAs, some bacterial lysidinylated isoleucine tRNAs, and the charging identity of suppressors, pseudo-tRNAs and other tRNAs with unusual structure. Download and Licensing of TFAM. From this page you can obtain a GNU tarballed and gzipped. Version of TFAM version 1.4.

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Teaching » Ardell Lab @ UC Merced - Studying how genomes express themselves

http://davidardell.org/teaching

Ardell Lab @ UC Merced. Studying how genomes express themselves. Award-winning Teaching in Molecular Biology and Bioinformatics. Bio 2: Introduction to Molecular Biology. Prof Ardell will next teach Bio 2 in Fall of 2014. The course covers Chapters 1-11 of. 3rd Ed. by Alberts Et Al (“Skinny Alberts”). Here are some recommended resources for learning molecular biology:. The illustrations of David Goodsell. I recommend his latest book. The Machinery of Life. Bio 182/QSB 282 Bioinformatics. In which partici...

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CMCpy » Ardell Lab @ UC Merced - Studying how genomes express themselves

http://davidardell.org/software/cmcpy

Ardell Lab @ UC Merced. Studying how genomes express themselves. Code-Message Coevolution Models in Python. CMCpy provides an object-oriented python API, together with command-line. Interface executables, that implement “Code-Message Coevolution” models. These published evolutionary models pertain to the evolution by natural. Selection of a genetic code in coevolution with a population of. Formally, CMC models are sets of quasispecies coupled together for their. Reassignment by code mutation. You should ...

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Faculty | Quantitative and Systems Biology

http://qsb.ucmerced.edu//who-we-are/unit

Molecular and Cell Biology. Life and Environmental Sciences. Filter by Emphasis Area. Quantitative and Theoretical Biology. Assistant Professor; Chair of QSB. Computational biology and evolution of gene expression mechanisms. Experimental evolution of antibiotic resistance in bacteria. Assistant Professor; Treasurer of QSB. Microbial ecology and biogeochemical cycling in the oceans. Assistant Professor; Secretary of QSB. Terrestrial paleoecology, niche and community modeling and phylochronology. Immunolo...

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Faculty | Quantitative and Systems Biology

http://qsb.ucmerced.edu/who-we-are/unit

Molecular and Cell Biology. Life and Environmental Sciences. Filter by Emphasis Area. Quantitative and Theoretical Biology. Assistant Professor; Chair of QSB. Computational biology and evolution of gene expression mechanisms. Experimental evolution of antibiotic resistance in bacteria. Assistant Professor; Treasurer of QSB. Microbial ecology and biogeochemical cycling in the oceans. Assistant Professor; Secretary of QSB. Terrestrial paleoecology, niche and community modeling and phylochronology. Immunolo...

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Ardell Lab @ UC Merced - Studying how genomes express themselves

Ardell Lab @ UC Merced. Studying how genomes express themselves. The Ardell lab is looking for masters and doctoral students to join the lab. Of our Research Interests. 2009 Ardell Lab @ UC Merced. Built on WP Framework. Mdash; Powered by WordPress.

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