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DDBJ Center provides sharing and analysis services for data from life science researches and advances science. Search & Analysis Submissions …

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DDBJ Center | ddbj.nig.ac.jp Reviews

https://ddbj.nig.ac.jp

DDBJ Center provides sharing and analysis services for data from life science researches and advances science. Search &amp;#038; Analysis Submissions …

SUBDOMAINS

clustalw.ddbj.nig.ac.jp clustalw.ddbj.nig.ac.jp

ClustalW | DDBJ

183 (Modified by Dr. Kirill Kryukov). Or COPY and PASTE:. Slow Pairwise Alignment Options. Fast Pairwise Alignment Options. Multiple Sequence Alignment Parameters. Last modified : 2015.8.28. Is licensed under a Creative Commons Attribution 2.1 Japan License.

blast.ddbj.nig.ac.jp blast.ddbj.nig.ac.jp

DDBJ | BLAST | blastn

Blastn (Query: DNA vs. Target: DNA) Help. Or COPY and PASTE:. DDBJ ALL (DDBJ periodical release daily updates). DDBJ New (DDBJ daily updates). Last modified : 2017.06.20. Is licensed under a Creative Commons Attribution 2.1 Japan License.

getentry.ddbj.nig.ac.jp getentry.ddbj.nig.ac.jp

DDBJ sequence search by accession number

Data retrieval by accession numbers. DDBJ / EMBL / GenBank. Total nt seq FASTA. CDS amino acid seq FASTA. CDS nt seq FASTA. Amino acid seq FASTA. Nt seq FASTA (for DAD). Last modified : 2016.01.07. Is licensed under a Creative Commons Attribution 2.1 Japan License.

ganglia.ddbj.nig.ac.jp ganglia.ddbj.nig.ac.jp

Ganglia:: NIG Super Computers Grid Grid Report

NIG Super Computers Grid Grid Report for Tue, 18 Aug 2015 23:34:44 0900. NIG Super Computers Grid Grid. Research month gpu queue. Research week hdd queue. Service month hdd queue. NIG Super Computers Grid Grid (5 sources). Current Load Avg (15, 5, 1m):. 51%, 50%, 50%. Avg Utilization (last hour):. Current Load Avg (15, 5, 1m):. 69%, 64%, 63%. Avg Utilization (last hour):. Current Load Avg (15, 5, 1m):. 92%, 94%, 96%. Avg Utilization (last hour):. Research month gpu queue. Current Load Avg (15, 5, 1m):.

sc.ddbj.nig.ac.jp sc.ddbj.nig.ac.jp

ホーム

2015 年 08 月 16 日. Lustreのsize,file項目は、現在のディスク使用量 全ユーザ合計 ディスク容量で表現しています。 Use / all prcent. Req / all percent. Month gpu.qとshort.qは実ノードが同じため、in use(使用メモリ量)が同じ値となります。 Use / all percent. Req / all percent. Use / all prcent. Req / all percent. Month gpu.qとshort.qは実ノードが同じため、in use(使用メモリ量)が同じ値となります。 Use / all percent. Req / all percent. Use / all percent. Req / all percent. Http:/ www.ncbi.nlm.nih.gov/pubmed/23180790. DDBJ new system and service refactoring. Resarch Organization of Information and Systems.

p.ddbj.nig.ac.jp p.ddbj.nig.ac.jp

DDBJ Read Annotation Pipeline

DDBJ Read Annotation Pipeline is a cloud-computing based analytical platform for next-generation sequencing data. DDBJ Read Annotation Pipelineは、次世代シーケンサ配列のクラウド型データ解析プラットフォームです。 By the guest account. DBCLS togotv Tutorial video 1 (JP) - Reference Genome Mapping. DBCLS 統合TV チュートリアル1 - 今日からはじめるDDBJ Read Annotation Pipeline. DBCLS togotv Tutorial video 2 (JP) - De novo Assembly. DBCLS 統合TV チュートリアル2 - DDBJ Read Annotation Pipelineによるde novo Assembly解析. チュートリアル : FTPでファイルをアップロードしDDBJ Pipelineへ登録する方法.

vector.ddbj.nig.ac.jp vector.ddbj.nig.ac.jp

DDBJ | BLAST | blastn

Blastn (Query: DNA vs. Target: DNA) Help. Or COPY and PASTE:. DDBJ ALL (DDBJ periodical release daily updates). DDBJ New (DDBJ daily updates). Last modified : 2014.8.26. Is licensed under a Creative Commons Attribution 2.1 Japan License.

trace.ddbj.nig.ac.jp trace.ddbj.nig.ac.jp

DDBJ Databases

Login & Submit. Archival database for raw and alignment data from next-generation sequencing platforms. Repository of sequence chromatograms (traces), base calls, and quality estimates for single-pass reads. Archival database for annotated nucleotide sequences. Public functional genomics data repository supporting MIAME and MINSEQE-compliant data submissions. Database represents research projects and organizes data deposited into several archival databases.

INTERNAL PAGES

ddbj.nig.ac.jp ddbj.nig.ac.jp
1

Data Archives | DDBJ

https://www.ddbj.nig.ac.jp/ftp_soap-e.html

Last updated 2016.4.12. FTP Server ftp:/ ftp.ddbj.nig.ac.jp/. DDBJ prepares and diffuses a snapshot of the International Nucleotide Sequence Databases of DDBJ/EMBL/GenBank four times a year. DDBJ Release in the flat file format. Nucleotide sequence database, latest DDBJ quarterly released data. DDBJ new data in flat file format. Daily update after the last release. 16S rRNA (Prokaryotes) READMEs. 16S rRNA (Prokaryotes) in FASTA format. Sequence data extracted from the latest DDBJ periodical release.

2

DDBJ website policy | DDBJ

https://www.ddbj.nig.ac.jp/sitepolicy-e.html

Last updated 2015.9.16. DDBJ prescribes its website policies in accordance with the policies of DDBJ’s parent organization, the Research Organization of Information and Systems. Before using DBBJ services, please read and understand all information provided in the links below. Since most of all communications regarding DDBJ services will be sent by email, please configure your email client to allow communications from DDBJ email addresses and avoid being categorized as junk mail. ROIS, only in Japanese).

3

How to Use DDBJ | DDBJ

https://www.ddbj.nig.ac.jp/ddbjingtop-e.html

How to Use DDBJ. Last updated 2016.4.15. How to Use DDBJ. The activity of the DDBJ and NIG Supercomputer System are evaluated by the acknowledgments of all of you. Please acknowledge in your papers, presentations and other publications, the role of DDBJ services and/or NIG Supercomputer System played in your research. This research was performed using " name of DDBJ Service, analytical tools. Computations were partially performed on the NIG supercomputer at ROIS National Institute of Genetics. Nucleic Ac...

4

Introduction of DDBJ | DDBJ

https://www.ddbj.nig.ac.jp/intro-e.html

Last updated 2016.1.21. DDBJ Center collects nucleotide sequence data as a member of INSDC (International Nucleotide Sequence Database Collaboration). And provides freely available nucleotide sequence data and supercomputer system, to support research activities in life science. The principal purpose of DDBJ operations is to improve the quality of INSD, as public domains. When researchers make their data open to the public through INSD and commonly shared in world wide. Nucleotide sequence records organi...

5

ARSA | DDBJ | Quick Search

https://www.ddbj.nig.ac.jp/arsa

ARSA (Search Condition) Help. Quick Search Advanced Search. Search all words PrimaryAccessionNumber:(AB999999 AND AB999998 .). Search any words PrimaryAccessionNumber:(AB999999 OR AB999999 .). Search all words AccessionNumber:(AB999999 AND AB888888 .). Search any words AccessionNumber:(AB999999 OR AB888888 .). Search any divisions Division:(HUM OR PRI .). Search ranging SequenceLength:[450 TO 500]. Search any molecular types MolecularType:(mRNA OR DNA .). Search ranging Date:[20090601 TO 20090701]. Searc...

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ayusafitri89.blogspot.com ayusafitri89.blogspot.com

INfoRmAtIoN tEcHnOlOgY: Bioinformatika

http://ayusafitri89.blogspot.com/2011/04/bioinformatika.html

Minggu, 10 April 2011. Bioinformatika merupakan ilmu terapan yang lahir dari perkembangan teknologi informasi dibidang molekular. Pembahasan dibidang bioinformatik ini tidak terlepas dari perkembangan biologi molekular modern, salah satunya peningkatan pemahaman manusia dalam bidang genomic yang terdapat dalam molekul DNA. Kemampuan untuk memahami dan memanipulasi kode genetik DNA ini sangat didukung oleh teknologi informasi melalui perkembangan hardware dan soffware. Baik pihak pabrikan sofware dan ...

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Creative Biomics

http://www.creative-biomics.com/resource.asp?classid=15

Documents and Tutorials. Documents and Tutorials. GenBank: National Center for Biotechnology Information. EMBL Nucleotide Sequence Database. DDBJ: DNA Data Bank of Japan. UniProt: United Protein Databases. PIR Protein Sequence Database. Gene Expression Omnibus (GEO, NCBI). READ (RIKEN cDNA Expression Array Database). Standford Microarray Database (SMD). Pathway and network databases. KEGG:Kyoto Encyclopedia of Genes and Genomes. PID: NCI-Nature Pathway Interaction Database.

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お知らせ一覧|統合データベースプロジェクト

http://lifesciencedb.mext.go.jp/oshiraseall.html

2011年3月18日 平成23年4月1日以降のサービス継続提供 統合データベースプロジェクト終了後 について. 日時 2011年3月18日 金 午後1時 午後6時. 会場 ライフサイエンス統合データベースセンター 教室 東京大学工学部12号館4階413、415号室 [アクセス]. 主催 文部科学省委託研究開発事業 統合データベースプロジェクト 、大学共同利用機関法人 情報 システム研究機構 ライフサイエンス統合データベースセンター DBCLS. 文部科学省委託研究開発事業 統合データベースプロジェクト の事業をご紹介するブースを BMB2010. 会期 2010年12月7日 火 12月10日 金. 第33回日本分子生物学会年会、第83回日本生化学会大会合同大会 にて 新型シーケンサーから得られるデータをどう解釈し活用するか 統合データベースプロジェクトからの提案. 日時 2010年12月7日 火 14:30 16:30. 会場 神戸国際展示場 3A会議室 第20会場. 文部科学省委託研究開発事業 統合データベースプロジェクト の事業をご紹介するブースを 第62回日本生物工学会大会. 日時 2010年7月...

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Welcome to My BLOG: BIOINFORMATIKA

http://nonachubby-artha.blogspot.com/2013/07/bioinformatika_3.html

Welcome to My BLOG. Rabu, 03 Juli 2013. Bioinformatika merupakan ilmu terapan yang lahir dari perkembangan teknologi informasi dibidang molekular. Pembahasan dibidang bioinformatik ini tidak terlepas dari perkembangan biologi molekular modern, salah satunya peningkatan pemahaman manusia dalam bidang genomic yang terdapat dalam molekul DNA. Kemampuan untuk memahami dan. Sekuensing DNA satu organisme, misalnya suatu virus memiliki kurang lebih 5.000 nukleotida atau molekul DNA atau sekitar 11 gen, yang...

nonachubby-artha.blogspot.com nonachubby-artha.blogspot.com

Welcome to My BLOG: BIOINFORMATIKA

http://nonachubby-artha.blogspot.com/2013/07/bioinformatika.html

Welcome to My BLOG. Rabu, 03 Juli 2013. Bioinformatika merupakan ilmu terapan yang lahir dari perkembangan teknologi informasi dibidang molekular. Pembahasan dibidang bioinformatik ini tidak terlepas dari perkembangan biologi molekular modern, salah satunya peningkatan pemahaman manusia dalam bidang genomic yang terdapat dalam molekul DNA. Kemampuan untuk memahami dan. Sekuensing DNA satu organisme, misalnya suatu virus memiliki kurang lebih 5.000 nukleotida atau molekul DNA atau sekitar 11 gen, yang...

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转移因子,提高人体免疫力--福建华灿生物科技有限公司

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DDBJ Center

WABI (Web API for Biology). Sequence Read Archive (DRA). Japanese Genotype-phenotype Archive (JGA). DDBJ Center Web Sites. DDBJ Center provides sharing and analysis services for data from life science researches and advances science. News from DDBJ Center. WABI (Web API for Biology). Sequence Read Archive (DRA). Japanese Genotype-phenotype Archive (JGA).

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