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dgrp.gnets.ncsu.edu

DGRP2

All DGRP data are open and can be found here. If you are experiencing difficulties or have general questions about this site, please visit the FAQ. UCSC Genome Browser track of DGRP2 data. If you use these data and/or this website for analyses, please cite the following manuscript:. Huang, Massouras, et al. This webtool allows users to perform genome wide association studies (GWAS) by providing phenotypes. Submit Phenotype Data for GWAS. Please complete steps I-III. Email address for results:.

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DGRP2 | dgrp.gnets.ncsu.edu Reviews
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All DGRP data are open and can be found here. If you are experiencing difficulties or have general questions about this site, please visit the FAQ. UCSC Genome Browser track of DGRP2 data. If you use these data and/or this website for analyses, please cite the following manuscript:. Huang, Massouras, et al. This webtool allows users to perform genome wide association studies (GWAS) by providing phenotypes. Submit Phenotype Data for GWAS. Please complete steps I-III. Email address for results:.
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DGRP2 | dgrp.gnets.ncsu.edu Reviews

https://dgrp.gnets.ncsu.edu

All DGRP data are open and can be found here. If you are experiencing difficulties or have general questions about this site, please visit the FAQ. UCSC Genome Browser track of DGRP2 data. If you use these data and/or this website for analyses, please cite the following manuscript:. Huang, Massouras, et al. This webtool allows users to perform genome wide association studies (GWAS) by providing phenotypes. Submit Phenotype Data for GWAS. Please complete steps I-III. Email address for results:.

INTERNAL PAGES

dgrp.gnets.ncsu.edu dgrp.gnets.ncsu.edu
1

FAQ

http://dgrp.gnets.ncsu.edu/faq.html

1 What does this website do? 2 How to prepare input files? 3 What are the output files? 4 How do I cite this website for publication? 1 What does this website do? This website enables easy and fast genome-wide association studies (GWAS) in the DGRP. Users upload a phenotype file and can expect to retrieve full association results, annotations of top associations, and diagnostic plots such as QQ plots and LD heatmaps in under 30 minutes. 2 How to prepare input files? 3 What are the output files? This fiel...

2

Data

http://dgrp.gnets.ncsu.edu/data.html

VCF file for the DGRP Freeze 2.0 calls. Plink formatted genotype ( BED. Space delimited, 0 = ref allele, 2 = alt allele (not necessarily minor), - = missing). Ayroles et al., Nat Genet, 2009. Expression data from 40 DGRP lines. Mackay, et al., Nature, 2012. Starvation resistance ( female. Startle response ( female. Chill coma recovery time ( female. Weber, et al., PLoS ONE, 2012. Oxidative stress [survival on paraquat] ( female. Oxidativestress [survival on msb] ( female. Swarup, et al., PNAS, 2013.

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johnpool.net johnpool.net

John Pool - Population Genomics Lab - Wisconsin

http://www.johnpool.net/genomes.html

Drosophila Genome Nexus, Version 1.1 , 12th July 2016. Reference alignments by Justin Lack. Jeremy Lange, and John Pool. With help from Alison Tang and Russ Corbett-Detig. To receive important updates and bug reports for these genomes, JOIN THE E-MAIL LIST. DGN 11 adds 499 more genomes to the previous data object. Other genomes are unchanged. The lists of data files below now inlclude the following data groups:. BERGMAN - genomes published by Bergman and Haddrill 2015. And Kao et al. 2015. The DPGP3 sequ...

philipfreda.com philipfreda.com

Links – Philip Freda

https://philipfreda.com/links

Ragland Lab: Seasonal Adaptation. Morgan Lab: Evolutionary and Ecological Genomics. Kansas State University – Department of Entomology. Kansas State University – Divison of Biology. Saint Joseph’s University – Department of Biology. Flybase – A Database of Drosophila. Drosophila Genetic Reference Panel (DGRP). The Arabidopsis Information Resource (TAIR). The Genomics Education Partnership (GEP). The Wagner Free Institute of Science (WFIS). GeoKids LINKS (Learning, Integrating, Nature, Kids, and Science).

flypusher48.blogspot.com flypusher48.blogspot.com

Fly Pushing in Tallahassee: 4月 2015

http://flypusher48.blogspot.com/2015_04_01_archive.html

今晩はちょっとゆっくりしようと思ってぼーっとテレビを見ていたら、安倍首相がアメリカ議会で歴史的な演説を行うというのでその生中継を静聴。色んな歴史的エピソードに触れつつ日米同盟の重要性と将来を示したなかなか良いトークで、意外と最後まで楽しめた。「alliance of hope」とかステキやん。それにしても随分ゆっくりと一語一語しっかり発音する感じの喋り方だったけど、ああいう場では結構有効なんかな。まぁウチらの学会トークではもちろん、あんな風にゆっくり喋る余裕は全くないけど。 ようやく晴れの天気が続きだしてずいぶんと暖かくなってきた。ということで昨日、日曜日は近くの山里で催されているタケノコ掘りへ行ってきた。ちゃんと管理されている竹林ということで、立派なタケノコがたくさん土の中から顔を出していた。子供の頃にどこかでタケノコ掘りに行った記憶があるんだけどもあまりよく覚えていない。タケノコ掘りって思っていたよりも意外と大変で、大きなヤツは一本掘るのも結構な重労働だった。でもやっぱり自分で掘りおこした...Death following traumatic brain injury in Drosophila.

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dgrp.gnets.ncsu.edu dgrp.gnets.ncsu.edu

DGRP2

All DGRP data are open and can be found here. If you are experiencing difficulties or have general questions about this site, please visit the FAQ. UCSC Genome Browser track of DGRP2 data. If you use these data and/or this website for analyses, please cite the following manuscript:. Huang, Massouras, et al. This webtool allows users to perform genome wide association studies (GWAS) by providing phenotypes. Submit Phenotype Data for GWAS. Please complete steps I-III. Email address for results:.

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dgrp.org -&nbspThis website is for sale! -&nbspdgrp Resources and Information.

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dgrp2.gnets.ncsu.edu dgrp2.gnets.ncsu.edu

DGRP2

All DGRP data are open and can be found here. If you are experiencing difficulties or have general questions about this site, please visit the FAQ. UCSC Genome Browser track of DGRP2 data. If you use these data and/or this website for analyses, please cite the following manuscript:. Huang, Massouras, et al. This webtool allows users to perform genome wide association studies (GWAS) by providing phenotypes. Submit Phenotype Data for GWAS. Please complete steps I-III. Email address for results:.

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