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Dill Group Projects

A collection of web apps from the Ken Dill Research Group.

http://www.dillgroup.io/

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Dill Group Projects | dillgroup.io Reviews
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A collection of web apps from the Ken Dill Research Group.
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1 dill group projects
2 triforce
3 i pmf
4 sea web
5 flexe web
6 netavg
7 interacto me
8 hplattice
9 apps for you
10 the laufer center
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Dill Group Projects | dillgroup.io Reviews

https://dillgroup.io

A collection of web apps from the Ken Dill Research Group.

LINKS TO THIS WEBSITE

laufercenter.org laufercenter.org

CODE & APPS

http://www.laufercenter.org/computational-tools

CHE/PHY 559 / AMS 537. For a collection of web apps based on research at the Laufer Center. The apps include an ion-ion PMF calculator, a web server based on the SEA solvation model, and tools based on FlexE and NetAvg for analyzing ensembles of protein conformations. To download the library. Laufer Center for Physical and Quantitative Biology Stony Brook University, Stony Brook, NY 11794-5252. Phone: 631.632.5400 Fax: 631.632.5405. Stony Brook University Home Page.

laufercenter.stonybrook.edu laufercenter.stonybrook.edu

CODE & APPS

http://laufercenter.stonybrook.edu/computational-tools

CHE/PHY 559 / AMS 537. For a collection of web apps based on research at the Laufer Center. The apps include an ion-ion PMF calculator, a web server based on the SEA solvation model, and tools based on FlexE and NetAvg for analyzing ensembles of protein conformations. To download the library. Laufer Center for Physical and Quantitative Biology Stony Brook University, Stony Brook, NY 11794-5252. Phone: 631.632.5400 Fax: 631.632.5405. Stony Brook University Home Page.

fennelllab.okstate.edu fennelllab.okstate.edu

Fennell Lab

http://fennelllab.okstate.edu/home-scrolling/portfolio-items

Happenings in and around the lab. Molecular Surface Areas with TRIFORCE. Written by Christopher Fennell. Published: 05 August 2014. Molecular Surface Areas with TRIFORCE. NIH, OSU, AGAUR. Nils J. D. Drechsel, Ken A. Dill, Jordi Vill&agrave Freixa. Molecular Transfer in Salty Water. Written by Christopher Fennell. Published: 05 August 2014. Small molecule solvation changes due to the presence of salt are governed by the cost of solvent cavity formation and dispersion. Libo Li, Ken A. Dill. This work (alon...

fennelllab.okstate.edu fennelllab.okstate.edu

Fennell Lab

http://fennelllab.okstate.edu/home/portfolio-items/49-effective-interactions-with-i-pmf

Effective Interactions Between Solvated Ions. Happenings in and around the lab. Effective Interactions Between Solvated Ions. Thursday, 17 July 2014. Written by Christopher Fennell. Effective Interactions Between Solvated Ions. From a systematic series of particle pair Potential of Mean Force (PMF) calculations we develop a rapid interpolation scheme that we call i-PMF. If you want to play with the tool. NIH, ALCC, ARRS. Miha Lukši&ccaron;, Ken A. Dill. Welcome, and farewell, Nils!

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Dill Group Projects

Tools for modeling molecules, from. And the Dill Research Group. Semianalytical calculation of molecular surface areas and derivatives as a function of atomic coordinates and radii. Potentials of mean force for ions of various sizes, interacting in explicit water (TIP3P). Compute solvation free energies using our SEA water model. Measure the similarity between two protein structures using a simple elastic network model. A tool for selecting one structure to represent an ensemble of conformations.

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The Dill Research Group

The Dill Research Group. Stony Brook University Home Page.

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The Dill Research Group

The Dill Research Group. Stony Brook University Home Page.

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