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Personal anthropology through the power of genomics
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Dodecad Ancestry Project | dodecad.blogspot.com Reviews
https://dodecad.blogspot.com
Personal anthropology through the power of genomics
Dodecad Ancestry Project: November 2012
http://dodecad.blogspot.com/2012_11_01_archive.html
Friday, November 30, 2012. Geno 2.0 patch for DIYDodecad. See important update at the end of this post). People who have tested using the Genographic Project. S Geno 2.0 test can now use the DIYDodecad. Tool with their data. The raw data download from this test has a slightly different format than the ones from 23andMe and Family Finder, so it is necessary to convert your data in a format that DIYDodecad can interpret. So, after you have downloaded and extracted the DIYDodecad software. You can use all a...
Dodecad Ancestry Project: December 2012
http://dodecad.blogspot.com/2012_12_01_archive.html
Sunday, December 2, 2012. D-statistics on ADMIXTURE components. The method of D-statistics as an R function. This will allow you to take your raw genotype data and calculate various D-statistics of the form:. D(Pop1, YOU; Pop3, Outgroup). Please read the original post. For details on how to use this tool. Subscribe to: Posts (Atom). 961 submissions of 23andMe data. 126 submissions of Family Finder data. 743 individuals in 97 Dodecad populations. DPD073 is our newest member. Behar et al. (2010). La Braña ...
Dodecad Ancestry Project: Geno 2.0 data request
http://dodecad.blogspot.com/2012/10/geno-20-data-request.html
Saturday, October 13, 2012. Geno 2.0 data request. If anyone has received results from the Geno 2.0 test of the Genographic Project. In time, and if there is interest, I may release additional calculators that make use of the particular SNP set tested by Geno 2.0. October 15, 2012 at 7:22 PM. October 16, 2012 at 6:02 PM. I am R-M222 and am hoping to have one of the 3 SNPs below M222. Some reports say there are 5-6 SNPs below M222 - so who knows, as some may be private or very restricted. Created by Diene...
Dodecad Ancestry Project: Do-It-Yourself Dodecad v 2.1
http://dodecad.blogspot.com/2011/09/do-it-yourself-dodecad-v-21.html
Sunday, September 18, 2011. Do-It-Yourself Dodecad v 2.1. DIYDodecad v 2.1 allows incomplete genotype files to be used, i.e., genotype. Files that do not include all expected SNP markers used in a calculator. This. Is useful to individuals having older genotype files from their testing. Companies, and allows the tool to be used with any type of genotype data, and. Not only the Illumina platforms currently used by 23andMe and FamilyTreeDNA. In the genotype file and do not have no-calls. Error in file(file...
Dodecad Ancestry Project: Do-It-Yourself Dodecad v 2.0
http://dodecad.blogspot.com/2011/08/do-it-yourself-dodecad-v-20.html
Tuesday, August 16, 2011. Do-It-Yourself Dodecad v 2.0. The newer version is DIYDodecad v 2.1. There are many new features in DIYDodecad 2.0, including by-chromosome and by-segment ancestry analysis, and a visualization tool that can be used in conjunction with it. Simple admixture analysis as in version 1.0. Is, of course, also included. You can download the RAR archive from Google Docs. File- Download original) or Sendspace. DIYDodecad works for Windows and 32/64bit Linux. Posted by Dodecad Project.
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Dienekes’ Anthropology Blog: The Taíno are extinct
http://dienekes.blogspot.com/2011/10/taino-are-extinct.html
October 26, 2011. Corrects itself for stating. Pre-Columbian inhabitants of the Caribbean were extinct:. This article originally stated that the Taíno were extinct, which is incorrect. Nature apologizes for the offence caused, and has corrected the text to better explain the research project described. This is, of course, nonsense. How timorous has the modern scientific culture become. When we say that the Taíno are extinct, we are, in fact claiming that a population group. Influenced by Bos primigenius.
Dienekes’ Anthropology Blog: Shortage of female math geniuses not due to "stereotype threat"
http://dienekes.blogspot.com/2012/01/shortage-of-female-math-geniuses-not.html
January 19, 2012. Shortage of female math geniuses not due to "stereotype threat". Men are over-represented at the high end of math performance: there are more male math geniuses than female ones. A theory that was proposed to explain that fact is that of stereotype threat. A video on the topic by the first author:. Review of General Psychology. Jan 16 , 2012, No Pagination Specified. doi: 10.1037/a0026617. Can stereotype threat explain the gender gap in mathematics performance and achievement? The diffe...
Dienekes’ Anthropology Blog: Oase1 had a Neandertal ancestor no earlier than ~200 years before his time
http://dienekes.blogspot.com/2015/06/oase1-had-neandertal-ancestor-no.html
June 24, 2015. Oase1 had a Neandertal ancestor no earlier than 200 years before his time. Several important conclusions of the discovery that Oase1 had a Neandertal ancestor 4-6 generations before his time (37-42 thousand years ago):. So, it seems that Neandertal admixture was not a one-off event but is bracketed at least by the period 50-40 thousand years ago and happened in at least two places: Europe and the Near East. My bet is on the Campanian Ignibrite. An early modern human from Romania with a rec...
Dienekes’ Anthropology Blog: Kennewick Man was a Native American
http://dienekes.blogspot.com/2015/06/kennewick-man-was-native-american.html
June 18, 2015. Kennewick Man was a Native American. The ancestry and affiliations of Kennewick Man. Well then, isnt that interesting Hg X2a. But he was not born nor raised in Columbia drainage, but from much further north, as he drank glacial melt water most of his life. And this paper says something a couple of people have been saying lately, namely that the thick bodied points of mesa/sluiceway/hasket and agate basin represent a population moving north from south America into clovis territory. After 40...
Dienekes’ Anthropology Blog: Γιατί πρέπει να ψηφίσουμε ΝΑΙ στις 5 Ιουλίου
http://dienekes.blogspot.com/2015/07/5.html
July 05, 2015. Γιατί πρέπει να ψηφίσουμε ΝΑΙ στις 5 Ιουλίου. Απευθύνω το παρόν σε όσους ειλικρινά πιστεύουν πως βοηθούν την Ελλάδα ψηφίζοντας Όχι στο δημοψήφισμα της 5 Ιουλίου. Υπάρχουν φυσικά και οι άλλοι, οι οποίοι υστερόβουλα θέλουν να επικρατήσει το Όχι: είτε γιατί έχουν διαφυλάξει τα χρήματα τους σε θυρίδες ή το εξωτερικό και προσδοκούν να κερδίσουν από τη δραχμή, είτε γιατί προσβλέπουν σε μια καταστροφική προεπαναστατική κατάσταση που θα τους βοηθήσει να αδράξουν την εξουσία. Οι δε, που επιθυμούν α...
Dienekes’ Anthropology Blog: 101 ancient genomes from Bronze Age Eurasia
http://dienekes.blogspot.com/2015/06/101-ancient-genomes-from-bronze-age.html
June 10, 2015. 101 ancient genomes from Bronze Age Eurasia. New data has been posted online. This seems related to this earlier post. Hopefully the study linked to this data will appear soon, but genome bloggers can get to it thanks to the early data release. Investigation of Bronze Age in Eurasia by sequencing from 101 ancient human remains. They got insights with genomes from Bronze age Armenia. Ive heard they also got Maikop and ancient Bulgarian genomes. Wednesday, June 10, 2015 2:38:00 pm. That pret...
Dienekes’ Anthropology Blog: Natural selection and ancient European DNA
http://dienekes.blogspot.com/2015/03/natural-selection-and-ancient-european.html
March 15, 2015. Natural selection and ancient European DNA. A new preprint on the bioRxiv studies the same data as the recent Haak et al. Paper, but focuses on natural selection in Europe. Until recently, selection could only be studied by looking at modern populations, but since selection is genetic change over time effected by the environment, it's possible that studies like this will be the norm in the future. The new study seems to confirm the results of Wilde et al. Another new development is the ab...
Dienekes’ Anthropology Blog: Complex demographic history of Western Central African Pygmies
http://dienekes.blogspot.com/2015/07/complex-demographic-history-of-western.html
July 12, 2015. Complex demographic history of Western Central African Pygmies. Doi: http:/ dx.doi.org/10.1101/022194. Whole genome sequence analyses of Western Central African Pygmy hunter-gatherers reveal a complex demographic history and identify candidate genes under positive natural selection. PingHsun Hsieh et al. Subscribe to: Post Comments (Atom). British origins (with ancient data). Phylogeographic refinement of haplogroup E. Y-chromosomes of Sicilian and Calabrian Arbereshe. Why Y-STR haplotype ...
Dienekes’ Anthropology Blog: Y-chromosomes of Sicilian and Calabrian Arbereshe
http://dienekes.blogspot.com/2015/07/y-chromosomes-of-sicilian-and-calabrian.html
July 12, 2015. Y-chromosomes of Sicilian and Calabrian Arbereshe. European Journal of Human Genetics. Advance online publication 1 July 2015; doi: 10.1038/ejhg.2015.138. Shared language, diverging genetic histories: high-resolution analysis of Y-chromosome variability in Calabrian and Sicilian Arbereshe. Stefania Sarno et al. Monday, July 13, 2015 3:31:00 pm. Not directly related to this article, but there is a new study about. Tuesday, July 21, 2015 8:58:00 pm. Thursday, July 23, 2015 6:30:00 am. You ar...
Dienekes’ Anthropology Blog: Afanasievo, Okunev, Andronovo, Sintashta DNA?
http://dienekes.blogspot.com/2015/03/afanasievo-okunev-andronovo-sintashta.html
March 28, 2015. Afanasievo, Okunev, Andronovo, Sintashta DNA? A reader alerts me to this article. In Russian, but you can use Google Translate to get the gist of it. Some interesting bits (note that "pit"=Yamna):. E As a result, according to geneticists, there was a population associated with the Corded Ware culture, and from it are the origin of the later Indo-European. By the same conclusions about the same time came the other team's leading geneticists led by Eske Villerslevom. Firstly, in okunevtsah ...
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Dodecad Ancestry Project
Sunday, December 2, 2012. D-statistics on ADMIXTURE components. The method of D-statistics as an R function. This will allow you to take your raw genotype data and calculate various D-statistics of the form:. D(Pop1, YOU; Pop3, Outgroup). Please read the original post. For details on how to use this tool. Friday, November 30, 2012. Geno 2.0 patch for DIYDodecad. See important update at the end of this post). People who have tested using the Genographic Project. The only difference is that at the step whe...