gydb.org
Gypsy Database 2.0
http://www.gydb.org/index.php/GINGER1
GIN/GINGER TRs and INTs. Clan AA Ref. DB. Cores Seq. DB. Genome Seq. DB. LTRs and TIRs Seq. DB. Mobile Group II introns DB. Tree of Life Project. From The Gypsy Database. Gypsy-Integrase-Related Type 1 ( GINGER1. Is a recently described pool of exon-intron transposons ( Bao et al. Which encode for a transposase (TR) showing the occurrence of a GPY/F module ( Malik and Eickbush 1999. Thought to mediate multimerization ( Ebina et al. At its C-terminus. GINGER1. Cysteine protease domain, or an Ulp1. Element...
gydb.org
Gypsy Database 2.0
http://www.gydb.org/index.php/Retroviridae
GIN/GINGER TRs and INTs. Clan AA Ref. DB. Cores Seq. DB. Genome Seq. DB. LTRs and TIRs Seq. DB. Mobile Group II introns DB. Tree of Life Project. From The Gypsy Database. Evolutionary history and viral taxonomy:. Vertebrate retroviruses ( Retroviridae. Originally received attention when infectious representatives were characterized in humans. However, it is now known that any LTR retrotransposon capable of recruiting a third ORF envelope gene ( env. Is potentially capable of becoming a retrovirus ( env.
gydb.org
Gypsy Database 2.0
http://www.gydb.org/index.php/GINA
GIN/GINGER TRs and INTs. Clan AA Ref. DB. Cores Seq. DB. Genome Seq. DB. LTRs and TIRs Seq. DB. Mobile Group II introns DB. Tree of Life Project. From The Gypsy Database. Is a recently described pool of exon-intron transposons ( Marin 2010. Which encode for a transposase (TR) showing the occurrence of a GPY/F module ( Malik and Eickbush 1999. Thought to mediate multimerization ( Ebina et al. At its C-terminus. GINA. Cysteine protease domain, or an Ulp1. Protease catalytic domain ( Marin 2010. Elements ar...
gydb.org
Gypsy Database 2.0
http://www.gydb.org/index.php/GINNY
GIN/GINGER TRs and INTs. Clan AA Ref. DB. Cores Seq. DB. Genome Seq. DB. LTRs and TIRs Seq. DB. Mobile Group II introns DB. Tree of Life Project. From The Gypsy Database. Is a recently described pool of exon-intron transposons ( Marin 2010. Which encode for a transposase (TR) showing the occurrence of a GPY/F module ( Malik and Eickbush 1999. Thought to mediate multimerization ( Ebina et al. At its C-terminus. GINNY. Cysteine protease domain, or an Ulp1. Protease catalytic domain ( Marin 2010. Elements a...
gydb.org
Gypsy Database 2.0
http://www.gydb.org/index.php/Bel/Pao
GIN/GINGER TRs and INTs. Clan AA Ref. DB. Cores Seq. DB. Genome Seq. DB. LTRs and TIRs Seq. DB. Mobile Group II introns DB. Tree of Life Project. From The Gypsy Database. Evolutionary history and in-progress taxonomy:. LTR retroelements ( Malik et al. Constitute a family of LTR retrotransposons and retroviruses described to date only in metazoan genomes ( Copeland et al. This family was originally characterized with the discovery of element sequences such as Pao. Davis and Judd 1995. And the various Cer.
nar.oxfordjournals.org
DPVweb: a comprehensive database of plant and fungal virus genes and genomes
http://nar.oxfordjournals.org/cgi/content/full/34/suppl_1/D382
View Current Issue (Volume 44 Issue 14 19 August 2016). DPVweb: a comprehensive database of plant and fungal virus genes and genomes. Michael J. Adams. John F. Antoniw. Plant-Pathogen Interactions Division, Wheat Pathogenesis Programme, Rothamsted Research Harpenden, Herts AL5 2JQ, UK. To whom correspondence should be addressed. Tel: 44 1582 763133; Fax: 44 1582 760981; Email: mike.adams{at}bbsrc.ac.uk. August 4, 2005. September 21, 2005. September 21, 2005. DPVweb ( http:/ www.dpvweb.net/. DESCRIPTION O...
gydb.org
Gypsy Database 2.0
http://www.gydb.org/index.php/Retroelements
GIN/GINGER TRs and INTs. Clan AA Ref. DB. Cores Seq. DB. Genome Seq. DB. LTRs and TIRs Seq. DB. Mobile Group II introns DB. Tree of Life Project. From The Gypsy Database. Tyrosine recombinase (YR) retroelements. Retroelements (retrotransposons and retroviruses) can currently be divided into four systems or groups commonly known as the long terminal repeat (LTR) retroelements. Eickbush and Jamburuthugoda 2008. Genes, and env. Families (for more details, see LTR retroelements. On the basis of their molecul...
gydb.org
Gypsy Database 2.0
http://www.gydb.org/index.php/Ty3/Gypsy
GIN/GINGER TRs and INTs. Clan AA Ref. DB. Cores Seq. DB. Genome Seq. DB. LTRs and TIRs Seq. DB. Mobile Group II introns DB. Tree of Life Project. From The Gypsy Database. Evolutionary history and in-progress taxonomy:. Branch 2 (non-chromodomain retroviruses and LTR retrotransposons). Of particular interest is the common evolutionarily history between several Ty3/Gypsy. Retroviruses (see, Eickbush and Malik 2002. Upon this, it is now known that env. Like genes are not exclusive of Retroviridae. Species t...
en.wikipedia.org
Plant virus - Wikipedia, the free encyclopedia
https://en.wikipedia.org/wiki/Plant_virus
From Wikipedia, the free encyclopedia. Pepper mild mottle virus. Like all other viruses, plant viruses are obligate intracellular parasites. That do not have the molecular machinery to replicate. Plant viruses are pathogenic. While this article does not intend to list all plant viruses, it discusses some important viruses as well as their uses in plant molecular biology. Transmission of plant viruses. Seed and pollen borne viruses. Translation of plant viral proteins. Production of sub-genomic RNAs.
gydb.uv.es
Gypsy Database 2.0
http://gydb.uv.es/index.php/LTR_retroelements
BLAST and HMM servers are currently under maintenance. GIN/GINGER TRs and INTs. Clan AA Ref. DB. Cores Seq. DB. Genome Seq. DB. LTRs and TIRs Seq. DB. Mobile Group II introns DB. Tree of Life Project. From The Gypsy Database. And other non-autonomous retroelements evolved from LTR retroelements. We additionally consider caulimoviruses of plants within the system of autonomous LTR retroelements because of their common evolutionary relationship with them based on the gag-pol region. The internal region con...
