seqahead.cs.tu-dortmund.de
wgs:wg3:start (SeqAhead)
http://seqahead.cs.tu-dortmund.de/wgs:wg3:start
Design and implementation of software or software platforms for efficient and versatile analysis of next generation sequencing data. Links to existing tools are posted below. Please try to keep the list organized. Removing known adapters before mapping. Mapping exactly reads without genome indexing. Indexing collections of reads (library). Biologist-friendly NGS data analysis and visualization software. Eija Korpelainen et al. Regulatory Sequence Analysis Tools software suite. Jacques van Helden et al.
bioinformatics.oxfordjournals.org
EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats
http://bioinformatics.oxfordjournals.org/content/29/10/1325.full
View Current Issue (Volume 32 Issue 16 August 15, 2016). EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats. EMBL European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, UK,. Computational Biology Unit, Uni Computing, 5008 Bergen, Norway,. Department of Informatics, University of Bergen, 5008 Bergen, Norway and. School of Computer Science, The University of Manchester, Manchester, M13 9PL, UK. To whom correspondence should be addressed. July 16, 2012.