foldxyasara.switchlab.org

FoldX plugin for YASARA - FoldX plugin for YASARA

FoldX plugin for YASARA. From FoldX plugin for YASARA. Redirected from Main Page. Welcome to the homepage of the FoldX plugin for YASARA. FoldX tools menu in YASARA. The FoldX plugin for YASARA is a software package to access and run FoldX commands in YASARA. FoldX is normally run from the command line without graphics. By installing the FoldX plugin for YASARA, you can access the most important FoldX tools at the touch of a button in the 3D graphical YASARA interface. You directly see the result...Atten...

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FoldX plugin for YASARA - FoldX plugin for YASARA | foldxyasara.switchlab.org Reviews

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FoldX plugin for YASARA. From FoldX plugin for YASARA. Redirected from Main Page. Welcome to the homepage of the FoldX plugin for YASARA. FoldX tools menu in YASARA. The FoldX plugin for YASARA is a software package to access and run FoldX commands in YASARA. FoldX is normally run from the command line without graphics. By installing the FoldX plugin for YASARA, you can access the most important FoldX tools at the touch of a button in the 3D graphical YASARA interface. You directly see the result...Atten...

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1 FoldX plugin for YASARA

2 Changelog

3 Citing

4 Contact

5 FoldX tools in YASARA

6 Installation and first use

7 More YASARA plugins from our group

8 Papers using the plugin

9 Request a new feature

10 Special thanks

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FoldX plugin for YASARA - FoldX plugin for YASARA | foldxyasara.switchlab.org Reviews

https://foldxyasara.switchlab.org

FoldX plugin for YASARA. From FoldX plugin for YASARA. Redirected from Main Page. Welcome to the homepage of the FoldX plugin for YASARA. FoldX tools menu in YASARA. The FoldX plugin for YASARA is a software package to access and run FoldX commands in YASARA. FoldX is normally run from the command line without graphics. By installing the FoldX plugin for YASARA, you can access the most important FoldX tools at the touch of a button in the 3D graphical YASARA interface. You directly see the result...Atten...

INTERNAL PAGES

foldxyasara.switchlab.org

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FoldX plugin for YASARA:About - FoldX plugin for YASARA

http://foldxyasara.switchlab.org/index.php/FoldX_plugin_for_YASARA:About

FoldX plugin for YASARA:About. From FoldX plugin for YASARA. The FoldX plugin for YASARA has originally been developed by Joost Van Durme. At the VIB Switch Laboratory. Located at the Katholieke Universiteit Leuven. Retrieved from " http:/ foldxyasara.switchlab.org/index.php/FoldX plugin for YASARA:About. This page was last modified on 15 March 2016, at 21:33. This page has been accessed 4,995 times. About FoldX plugin for YASARA.

2

Recent changes - FoldX plugin for YASARA

http://foldxyasara.switchlab.org/index.php/Special:RecentChanges

From FoldX plugin for YASARA. Track the most recent changes to the wiki on this page. 32; 100. 32; 250. 32; 500. Changes in last 1. 32; 3. 32; 7. 32; 14. 32; 30. Minor edits Show. Bots Hide. Anonymous users Hide. Logged-in users Hide. Show new changes starting from 13:00, 25 August 2016. FoldX plugin for YASARA. FoldX plugin for YASARA talk. Retrieved from " http:/ foldxyasara.switchlab.org/index.php/Special:RecentChanges. About FoldX plugin for YASARA.

3

Training exercises - FoldX plugin for YASARA

http://foldxyasara.switchlab.org/index.php/Training_exercises

From FoldX plugin for YASARA. Predict effect of a point mutation on protein structure stability. Predict effect of a point mutation on protein-DNA binding. Running FoldX from the command line. Before we start, some basic information about FoldX energies is necessary. First of all, FoldX energies are expressed in kcal/mol. The main focus of FoldX is the prediction of free energy changes. Eg what happens to the free energy of the protein when we mutate an Asp to a Tyr? G(change) = Δ. G(MT) - Δ. In YASARA&#...

4

Changes related to "FoldX plugin for YASARA" - FoldX plugin for YASARA

http://foldxyasara.switchlab.org/index.php/Special:RecentChangesLinked/FoldX_plugin_for_YASARA

Changes related to FoldX plugin for YASARA. From FoldX plugin for YASARA. FoldX plugin for YASARA. This is a list of changes made recently to pages linked from a specified page (or to members of a specified category). Pages on your watchlist. 32; 100. 32; 250. 32; 500. Changes in last 1. 32; 3. 32; 7. 32; 14. 32; 30. Minor edits Show. Bots Hide. Anonymous users Hide. Logged-in users Hide. Show new changes starting from 13:00, 25 August 2016. FoldX plugin for YASARA.

5

Papers using the plugin - FoldX plugin for YASARA

http://foldxyasara.switchlab.org/index.php/Papers_using_the_plugin

Papers using the plugin. From FoldX plugin for YASARA. Help us to complete this list and let us know if you have a published paper using the FoldX plugin for YASARA. We will be very grateful. Zhang Z, Witham S, Petukh M, Moroy G, Miteva M, Ikeguchi Y, Alexov E. A rational free energy-based approach to understanding and targeting disease-causing missense mutations. J Am Med Inform Assoc. 2013 Feb 13. J Biol Chem. 2013 Jan 4;288(1):510-9. Andrew AJ, Berndsen CE, Kao S, Strebel K. J Biomol Struct Dyn. 2...

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yasara.org

YASARA - Links and resources

http://www.yasara.org/weblinks.htm

If you are working with YASARA yourself and have a website to show, please add it here. The Center for Molecular and Biomolecular Informatics at the Radboud University Nijmegen, the Netherlands, is our main academic partner. It hosts the YASARA download servers and makes extensive use of YASARA for research and teaching (image on the right courtesy of Bart van Dieken. Often combined in the Twinset with the CMBI's inhouse software WHAT IF. Working with NMR spectroscopy? Then visit the QUEEN. Scientific an...

switchlab.org

FoldX plugin for YASARA | Switch Laboratory

http://www.switchlab.org/bioinformatics/foldxyasara

Mapping aggregation-specific interactions in human disease. FoldX plugin for YASARA. FoldX plugin for YASARA. Http:/ foldxyasara.switchlab.org. The FoldX plugin for YASARA is a software package to access and run FoldX commands in YASARA. FoldX is normally run from the command line without graphics. By installing the FoldX plugin for YASARA, you can access the most important FoldX tools at the touch of a button in the 3D graphical YASARA interface. You directly see the results of your FoldX protei...This ...

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foldxyasara.switchlab.org

FoldX plugin for YASARA - FoldX plugin for YASARA

FoldX plugin for YASARA. From FoldX plugin for YASARA. Redirected from Main Page. Welcome to the homepage of the FoldX plugin for YASARA. FoldX tools menu in YASARA. The FoldX plugin for YASARA is a software package to access and run FoldX commands in YASARA. FoldX is normally run from the command line without graphics. By installing the FoldX plugin for YASARA, you can access the most important FoldX tools at the touch of a button in the 3D graphical YASARA interface. You directly see the result...Atten...

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