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Fraenkel Lab home page

Systems Biology of Disease. Current projects focus on the study of cancer, neurodegenerative diseases, and diabetes. On our YouTube Channel.

http://fraenkel.mit.edu/

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Fraenkel Lab home page | fraenkel.mit.edu Reviews
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Systems Biology of Disease. Current projects focus on the study of cancer, neurodegenerative diseases, and diabetes. On our YouTube Channel.
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Fraenkel Lab home page | fraenkel.mit.edu Reviews

https://fraenkel.mit.edu

Systems Biology of Disease. Current projects focus on the study of cancer, neurodegenerative diseases, and diabetes. On our YouTube Channel.

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1

Fraenkel Lab people page

http://fraenkel.mit.edu/people.html

Associate Professor, Biological Engineering. Research Associate, Broad Institute. Graduate student, MIT. Assistant Professor, University of Wisconsin-Madison. Director of the Synthetic Biology Foundry, Broad Institute/MIT. Research Scientist, Sage Bionetworks. Post-doc, Salk Institute. Senior Research Scientist, EnBiotix, Inc. Data Scientist, Dow Jones. Bioinformatics Grad Student, Boston University. Alice (Kin Yui) Lo. Post-doc, Institute of Medical Biology, Singapore. Graduate Student, BU.

2

Fraenkel Lab Publication, Download page

http://fraenkel.mit.edu/publications.html

Complete Publications and Downloads. Revealing disease-associated pathways by network integration of untargeted metabolomics. Leila Pirhaji, Pamela Milani, Mathias Leidl, Timothy Curran, Julian Avila-Pacheco, Clary B Clish, Forest M White, Alan Saghatelian, and Ernest Fraenkel. Nature Methods 2016; doi: 10.1038/NMETH.3940. Network Modeling Identifies Patient-specific Pathways in Glioblastoma. Scientific Reports 2016; doi: 10.1038/srep28668. Integrative Biology 2016; doi: 10.1039/C6IB00040A. Plos Computat...

3

Fraenkel Lab Software & Tools

http://fraenkel.mit.edu/software.html

PIUMet: Revealing the Hidden Components in Regulatory and Signaling Networks by Integrating Proteomics, Transcriptome and Interactome Data. Omics Integrator: the garnet-forest bundle of python scripts for analyzing diverse forms of 'omic' data in a network context. SAMNetWeb: identifying condition-specific networks linking signaling and transcription. AdipoSight: a web-based tool for exploring adipocyte transcription regulation based on DNA sequence motif analysis on DNase hypersensitivity data.

4

Fraenkel Lab home page

http://fraenkel.mit.edu/index.html

Systems Biology of Disease. Current projects focus on the study of cancer, neurodegenerative diseases, and diabetes. On our YouTube Channel.

5

Fraenkel Lab positions page

http://fraenkel.mit.edu/positions.html

Postdoctoral position at Microsoft Research New England in Cambridge, MA, to work on a joint project with my lab and that of Riccardo Zecchina. To apply for this position:. Visit http:/ research.microsoft.com/en-us/jobs/fulltime/postdoc.aspx. For detailed application guidance. Please list select "Computational Systems Biology" as your research area, which can be found under the "Select Positions and More" section of the Microsoft Research application. We are looking for highly motivated candidates to par...

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Members | CEHS

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Skip to main content. Cite the Center Support. Past Pilot Project Recipients. Facilities Core Inquiry Form. NF: Postdoc Transition Seminar. The Center consist of 45 center members, of which 40 are faculty members and five are research members. Our membership crosses 9 departments. Harvard/MIT Division of Health Sciences and. Biological Engineering, Media Lab. John M. Essigmann. Biological Engineering, Chemistry. Biological Engineering, Division of Comparative Medicine. Civil and Environmental Engineering.

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