frankenzyme.com

Frankenzyme · Surface Screen Results

Currently v2.1.0. Update the local PDB. As the local version for space reasons. You need to run it twice for some reason. Perl /Users/tbinkowski/Box Sync/xScripts/pdb-syncAndExtract.pl -sync -verbose perl /Users/tbinkowski/Box Sync/xScripts/pdb-syncAndExtract.pl. Generate Surfaces using FPocket. Walk the PDB-style directory and run FPocket on each file. It uses the file as it is written so you may want to preprocess it depending on needs. Python create pockets.py. Generate Surfaces using HetContacts.

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Frankenzyme · Surface Screen Results | frankenzyme.com Reviews

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Currently v2.1.0. Update the local PDB. As the local version for space reasons. You need to run it twice for some reason. Perl /Users/tbinkowski/Box Sync/xScripts/pdb-syncAndExtract.pl -sync -verbose perl /Users/tbinkowski/Box Sync/xScripts/pdb-syncAndExtract.pl. Generate Surfaces using FPocket. Walk the PDB-style directory and run FPocket on each file. It uses the file as it is written so you may want to preprocess it depending on needs. Python create pockets.py. Generate Surfaces using HetContacts.

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Frankenzyme · Surface Screen Results | frankenzyme.com Reviews

https://frankenzyme.com

Currently v2.1.0. Update the local PDB. As the local version for space reasons. You need to run it twice for some reason. Perl /Users/tbinkowski/Box Sync/xScripts/pdb-syncAndExtract.pl -sync -verbose perl /Users/tbinkowski/Box Sync/xScripts/pdb-syncAndExtract.pl. Generate Surfaces using FPocket. Walk the PDB-style directory and run FPocket on each file. It uses the file as it is written so you may want to preprocess it depending on needs. Python create pockets.py. Generate Surfaces using HetContacts.

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frankenzyme.com

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Conduct a Suface Distribution Run · Frankenzyme

http://frankenzyme.com/2014/07/22/conduct-surface-distribution-run

Currently v2.1.0. Conduct a Suface Distribution Run. Clean the PDB file. Python /Users/tbinkowski/Box Sync/xScripts/Proteinworks/bin/pdb clean.py -pdb in apc114168-cur out.pdb -prefix test -chains [A]. Generate surface for a single file. Users/tbinkowski/Box Sync/xDevelopment/fpocket2/bin/fpocket -f pdbfile.pdb. Perfect match is (0.0, 1.0). Grep -v -1 PREFIX 0 2014-07-23-1406141133.sdscreen.txt sort -nk 5. Align a structure to a pocket. Align apc113179, pocket1 atm. Update Surface Library 23 Jul 2014.

2

404: Page not found · Frankenzyme

http://frankenzyme.com/404

Currently v2.1.0. 404: Page not found. Sorry, we've misplaced that URL or it's pointing to something that doesn't exist. Head back home. To try finding it again.

3

Example content · Frankenzyme

http://frankenzyme.com/2012/02/07/example-content

Currently v2.1.0. This is an example blog post that shows several types of HTML content supported in this theme. Cum sociis natoque penatibus et magnis dis parturient montes. Aenean eu leo quam. Pellentesque ornare sem lacinia quam venenatis vestibulum. Sed posuere consectetur est at lobortis. Cras mattis consectetur purus sit amet fermentum. Curabitur blandit tempus porttitor. Nullam quis risus eget urna mollis ornare vel eu leo. Nullam id dolor id nibh ultricies vehicula ut id elit. Mdash; Mark otto.

4

What's Jekyll? · Frankenzyme

http://frankenzyme.com/2012/02/06/whats-jekyll

Currently v2.1.0. Is a static site generator, an open-source tool for creating simple yet powerful websites of all shapes and sizes. From the projects readme. Jekyll is a simple, blog aware, static site generator. It takes a template directory [.] and spits out a complete, static website suitable for serving with Apache or your favorite web server. This is also the engine behind GitHub Pages, which you can use to host your project’s page or blog right here from GitHub. Update Surface Library 23 Jul 2014.

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· Frankenzyme

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frankenzyme.com

Frankenzyme · Surface Screen Results

Currently v2.1.0. Update the local PDB. As the local version for space reasons. You need to run it twice for some reason. Perl /Users/tbinkowski/Box Sync/xScripts/pdb-syncAndExtract.pl -sync -verbose perl /Users/tbinkowski/Box Sync/xScripts/pdb-syncAndExtract.pl. Generate Surfaces using FPocket. Walk the PDB-style directory and run FPocket on each file. It uses the file as it is written so you may want to preprocess it depending on needs. Python create pockets.py. Generate Surfaces using HetContacts.

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