funseq.gersteinlab.org
funseqfunseq website
http://funseq.gersteinlab.org/
funseq website
http://funseq.gersteinlab.org/
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funseq | funseq.gersteinlab.org Reviews
https://funseq.gersteinlab.org
funseq website
funseq.gersteinlab.org
funseq
http://funseq.gersteinlab.org/result
Job ID is an ID generated by our website. It is used to get back your job's result.
funseq
http://funseq.gersteinlab.org/downloads
Last updated: 06 May 2013. This software is freely licensed under the Creative Commons license (Attribution-NonCommerical). The main aspects of this license are that:. The work can be made available for non-commercial use. Derivatives can be made of the work. Derivatives do not have to be made available under the same terms that they were first used, and. We should be cited. Used in Khurana et al. (2013). Can be obtained here. From Khurana et al. (2013). Can be obtained here.
funseq
http://funseq.gersteinlab.org/analysis
Online Tool (testing .). Input file: (this pipeline is for hg19; SNV only). FunSEQ takes BED or VCF files as input. Sample input file. With multiple files, FunSEQ also do recurrent analysis. Minor allele frequency threshold to filter 1KG phaseI SNVs (value 0 1). If MAF=0, all variants in 1KG will be filtered out. For germline or recurrent analysis, we suggest downloading the software. The program needs a few minutes. You can remain on this page and wait for the result, or you can copy your.
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Running FunSeq | Gerstein Lab FAQs
https://faq.gersteinlab.org/2014/05/13/running-funseq
Skip to primary content. May 13, 2014. You should be able to download this software on a mac and use it. You can download it from funseq.gersteinlab.org. Since you are not familiar with downloading software, have you tried to use the online version at http:/ funseq.gersteinlab.org/analysis. You can upload your file and see what you get. This entry was posted in Uncategorized. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:.
Gerstein Lab Abstracts: August 2014
http://abstracts.gersteinlab.org/2014_08_01_archive.html
Saturday, August 30, 2014. Re: Abstract for SAMSI meeting, Opening workshop '14 (i0samsi). Http:/ www.samsi.info/bio-ow. The ENCODE and modENCODE consortia have generated a resource. Containing large amounts of transcriptomic data, extensive mapping of. Chromatin states, as well as the binding locations of over 300. Transcription-regulatory factors for human, worm and fly. The consortium performed. Extensive data integration by constructing genome-wide co-expression. Cross-organism parameters can predict...
Gerstein Lab Abstracts: December 2013
http://abstracts.gersteinlab.org/2013_12_01_archive.html
Thursday, December 5, 2013. Abstract for Talk at University of Connecticut Health Center (i0ccam). Plummeting sequencing costs have led to a great increase in the number. Of personal genomes. Interpreting the large number of variants in. Them, particularly in non-coding regions, is a central challenge for. Genomics. We investigate patterns of selection in DNA elements from. The ENCODE project using the full spectrum of sequence variants from. Very strong selection constraint, comparable to coding genes:.
Gerstein Lab Abstracts: November 2013
http://abstracts.gersteinlab.org/2013_11_01_archive.html
Saturday, November 30, 2013. Abstract for Talk at Keystone Big Data Symposium (i0keybdata). My talk will discuss Human Genome Analysis from a data science perspective. Plummeting sequencing costs have led to a great increase in the number. Of personal genomes. Interpreting the large number of variants in. Them, particularly in non-coding regions, is a central challenge for. One data science construct that is particularly useful for genome. Interpretation is networks. My talk will be concerned with the.
Gerstein Lab Abstracts: October 2013
http://abstracts.gersteinlab.org/2013_10_01_archive.html
Saturday, October 19, 2013. Fwd: Abstract for Talk at Duke (i0duke). Plummeting sequencing costs have led to a great increase in the number. Of personal genomes. Interpreting the large number of variants in. Them, particularly in non-coding regions, is a central challenge for. Genomics. We investigate patterns of selection in DNA elements from. The ENCODE project using the full spectrum of sequence variants from. 1,092 individuals in the 1000 Genomes Project Phase 1, including. Using these results, we de...
Gerstein Lab FAQs | Frequently Asked Questions | Page 2
https://faq.gersteinlab.org/page/2
Skip to primary content. Skip to secondary content. Newer posts →. May 13, 2014. You should be able to download this software on a mac and use it. You can download it from funseq.gersteinlab.org. Since you are not familiar with downloading software, have you tried to use the online version at http:/ funseq.gersteinlab.org/analysis. You can upload your file and see what you get. Mutations in sensitive and ultra-sensitive regions. February 3, 2014. Thanks for your interest in our paper. December 11, 2013.
ek | Gerstein Lab FAQs
https://faq.gersteinlab.org/tag/ek
Skip to primary content. Skip to secondary content. May 13, 2014. You should be able to download this software on a mac and use it. You can download it from funseq.gersteinlab.org. Since you are not familiar with downloading software, have you tried to use the online version at http:/ funseq.gersteinlab.org/analysis. You can upload your file and see what you get. Mutations in sensitive and ultra-sensitive regions. February 3, 2014. I can’t find them in the paper although they are mentioned. I would guess...
Uncategorized | Gerstein Lab FAQs
https://faq.gersteinlab.org/category/uncategorized
Skip to primary content. Skip to secondary content. May 13, 2014. You should be able to download this software on a mac and use it. You can download it from funseq.gersteinlab.org. Since you are not familiar with downloading software, have you tried to use the online version at http:/ funseq.gersteinlab.org/analysis. You can upload your file and see what you get. Blog at WordPress.com. Blog at WordPress.com.
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FUNSEPA - Portal de contenidos educativos
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Their Profile - FunSeppel - Skyrock.com
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funseptum.org
funseq
A new version is available here: FunSeq2. This site can be used to automatically score and annotate disease-causing potential of SNVs, particularly the non-coding ones. It can be used on cancer and personal genomes. It also contains a downloadable tool (found under ' Downloads. Ction based Prioritization of. An online version of the tool is available, where a personal or cancer genome variant file (VCF or BED) can be uploaded and analysed.
funser.com - funser Resources and Information.
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