neurowissenschaft.wordpress.com
Computational Neuroscience | Neuro Scripts
https://neurowissenschaft.wordpress.com/computational-neuroscience
8220;it is difficult or impossible for present-day humans to predict what a post-singularity world would be like…”. Lectures at Technische Univesität München ( original resource. Introduction to Computational Neuroscience. Together with Erich Schneider. 2) Neurons, Resting membrane potential, Ion channels, Action potential, etc. 3) Hodgkin-Huxley, Phase Plane analysis. 4) Leaky integrate-and-fire, Synaptic transmission, From spikes to firing rate. 5a) Information theoretic approach. Single neuron decodin...
andrewdavison.info
Andrew Davison: Modelling simple neurons with PyMOOSE
http://www.andrewdavison.info/notes/modelling-simple-neurons-pymoose
Modelling simple neurons with PyMOOSE. Multiscale Object-oriented Simulation Environment) is a modelling framework for biological and neuronal networks, developed in Upinder Bhalla. In Bangalore. In terms of concepts and goals, it is a descendant of the GENESIS. 2 simulator (another descendant being GENESIS 3). MOOSE comes with a graphical interface, but what I find most interesting is its Python interface, developed by Subhasis Ray. PyMOOSE is described in an article in Frontiers in Neuroinformatics.
terbios.org
Computing and Soft
http://www.terbios.org/computing-and-soft
Modeling and Data Sources. Http:/ econnectome.umn.edu/. Website for eConnectome (A MATLAB Toolbox for Mapping and Imaging of Brain Functional Connectivity). Http:/ psychophysiology.cpmc.columbia.edu. Current Source Density (CSD) Interpolation using Spherical Splines. Http:/ www.urut.ch/new/serendipity/index.php? Actively maintained software projects. Http:/ www.fil.ion.ucl.ac.uk/spm/. Http:/ www.fz-juelich.de/inm/inm-. Http:/ mialab.mrn.org/software/. Http:/ fsl.fmrib.ox.ac.uk/fsl/fslwiki/. Today the ent...
neurodebian.ovgu.de
NeuroDebian “Derivatives” — Debian Neuroscience Package Repository
http://neurodebian.ovgu.de/derivatives.html
NeuroDebian “Derivatives”. NeuroDebian “Derivatives”. In a traditional sense because we are working within Debian. Project thus not providing our custom installer etc. But we are a Linux-distribution providing a repository of up-to-date builds and maintaining a NeuroDebian Virtual Machine. Deployment of Debian. Because of the openness and modularity of Debian other enthusiasts develop customized derivative solutions to address their particular needs. This page presents some of such. 1004 LTS and Xubuntu.
neuroml.org
NeuroML - A Model Description Language for Computational Neuroscience
https://www.neuroml.org/tool_support
A Model Description Language for Computational Neuroscience. Specifications v1.8.1. Examples v1.8.1. Current Application Support For NeuroML. The following is a list of software applications which currently support NeuroML (last updated: March 2014). Note that not all tools support all parts of NeuroML. If you would like your application included on this list! It's only through user feedback that features like this will make it further up long TODO lists. Supports morphologically detailed single cells.
topbestalternatives.com
10 Alternatives to GNS3 | Top Best Alternatives
http://www.topbestalternatives.com/2015/5-best-alternatives-to-gns3
10 Alternatives to GNS3. 10 Alternatives to GNS3. It is a simulator which can be used in training and education, but also in research for simple computer network simulations. It is created by Cisco Systems and provided for free supply to faculty, students and alumni; those are the participants in the Cisco Networking Academy. Cisco Packet Tracer is an intense system reproduction program that permits understudies to try different things with system conduct and ask “imagine a scenario…. It designs, manufac...
neurospaces.blogspot.com
Comments on Neurospaces Software Development: March 2010
http://neurospaces.blogspot.com/2010_03_01_archive.html
Comments on Neurospaces Software Development. Wednesday, March 17, 2010. NeuroML, NineML and Neurospaces / GENESIS 3. Simulators has been beneficial for both, and at the same time these simulators have always been substantially different, serving different parts of the computational neuroscience community. With the now mature core of the Neurospaces. So where do we go from here? The current roles in the G-3 team can be summarized as:. GUI scripting in python (evaluation). Lead of GUI development. Get fam...
si-elegans.eu
Links
http://www.si-elegans.eu/links.html
Symposium on Neuro-Bio-Inspired Computation and Architectures (NeBICA 2015). International Joint Conference on Neural Networks (IJCNN 2015). The idea and endeavour of simulating. Is not new. It has been suggested several times (e.g., NemaSys. US, 1997), Virtual. Project (Japan, 2004) and is currently pursued by the openworm. With all of its cells) published by Grove and Sternberg (Grove and Sternberg, 2011). Currently two biological accurate 3D models of. A physics engine for biomedical applications (All...
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