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GeneTrail2

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. Data and perform enrichment analysis based on gene sets derived from popular databases like GO. Data and perform enrichment analysis based on protein datasets like SMPDB. Or map proteins to corresponding genes and perform a gene set analysis.

http://genetrail2.bioinf.uni-sb.de/

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GeneTrail2 | genetrail2.bioinf.uni-sb.de Reviews

https://genetrail2.bioinf.uni-sb.de

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. Data and perform enrichment analysis based on gene sets derived from popular databases like GO. Data and perform enrichment analysis based on protein datasets like SMPDB. Or map proteins to corresponding genes and perform a gene set analysis.

INTERNAL PAGES

genetrail2.bioinf.uni-sb.de genetrail2.bioinf.uni-sb.de
1

GeneTrail2

http://genetrail2.bioinf.uni-sb.de/index?pipeline=gene

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. Select your data source:. Containing data of both, the sample and the reference group. For the sample and the reference group. Containing a list of identifier with or without scores in a tabular format. Of scores in a tabular format. Offers you two mai...

2

GeneTrail2

http://genetrail2.bioinf.uni-sb.de/help?topic=about

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. Https:/ dti.bioinf.uni-sb.de. Https:/ genetrail2.bioinf.uni-sb.de. C code for enrichment algorithms (https:/ github.com/unisb-bioinf/genetrail2). Https:/ networktrail.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Is a web-interface providi...

3

GeneTrail2

http://genetrail2.bioinf.uni-sb.de/categories.html

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. The table below lists all categories that are available in GeneTrail2. You can filter the table using the search field. Explanation of the table fields. The organism the category is defined for. The source from which the categories were derived.

4

GeneTrail2

http://genetrail2.bioinf.uni-sb.de/index?pipeline=protein

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. Select your data source:. Containing a list of identifier with or without scores in a tabular format. Of scores in a tabular format. GDS identifier of sample group). GDS identifier of reference group). The Gene Expression Omnibus (GEO). Relies on the p...

5

GeneTrail2

http://genetrail2.bioinf.uni-sb.de/start.html

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. Data and perform enrichment analysis based on gene sets derived from popular databases like GO. Data and perform enrichment analysis based on protein datasets like SMPDB. Or map proteins to corresponding genes and perform a gene set analysis.

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LINKS TO THIS WEBSITE

regulatortrail.bioinf.uni-sb.de regulatortrail.bioinf.uni-sb.de

GeneTrail2

https://regulatortrail.bioinf.uni-sb.de/help?topic=about

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. Https:/ dti.bioinf.uni-sb.de. Https:/ genetrail2.bioinf.uni-sb.de. C code for enrichment algorithms (https:/ github.com/unisb-bioinf/genetrail2). Https:/ networktrail.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Is a web-interface providi...

regulatortrail.bioinf.uni-sb.de regulatortrail.bioinf.uni-sb.de

GeneTrail2

https://regulatortrail.bioinf.uni-sb.de/index?pipeline=reggae&amp;destination=reggae_workflow.html

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. Select your data source:. Containing data of both, the sample and the reference group. For the sample and the reference group. Containing a list of identifier with or without scores in a tabular format. Of scores in a tabular format. Offers you two mai...

regulatortrail.bioinf.uni-sb.de regulatortrail.bioinf.uni-sb.de

GeneTrail2

https://regulatortrail.bioinf.uni-sb.de/help?topic=contact

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. If you have any questions or suggestions for improving GeneTrail2. Or any other of our web services do not hesitate to contact us. Chair for Bioinformatics Saarbrücken. Campus E2 1, P.O. box 151150. D - 66041 Saarbrücken.

genetrail.bioinf.uni-sb.de genetrail.bioinf.uni-sb.de

GeneTrail - GeneTrail - A Gene Set Property Analysis Tool

http://genetrail.bioinf.uni-sb.de/index.php

Click here to try out the new GeneTrail2 web service offering up-to-date databases, more categories, support for more omics, and more enrichment algorithms. We present a comprehensive and efficient gene set analysis tool, called GeneTrail. We now provide the following additional analyses:. Wilcoxon-Mann-Whitney test for the distribution of SNPs (from NCBI dbSNP) and Homologues (from NCBI Homologene) in test versus reference set. ORA/GSEA for Pfam and Cath protein domains. ORA/GSEA for OMIM categories.

regulatortrail.bioinf.uni-sb.de regulatortrail.bioinf.uni-sb.de

RegulatorTrail

https://regulatortrail.bioinf.uni-sb.de/upload_bed.html?destination=tepic_workflow.html

Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Position weight matrices (PWMs). A web service for the identification of key transcriptional regulators. Please insert your username or email address. Please select a BED file containing open chromatin regions or histone marks:. Please specify the used genome assembly:. Click to additionally upload gene expression data. Please choose a text file containing gene expression values:.

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GeneTrail - GeneTrail - A Gene Set Property Analysis Tool

We present a comprehensive and efficient gene set analysis tool, called GeneTrail. We now provide the following additional analyses:. Wilcoxon-Mann-Whitney test for the distribution of SNPs (from NCBI dbSNP) and Homologues (from NCBI Homologene) in test versus reference set. ORA/GSEA for Pfam and Cath protein domains. ORA/GSEA for miRNA target genes (from Sanger miRBase). ORA/GSEA for OMIM categories. The official GeneTrailExpress paper was published in the BMC Bioinformatics journal:.

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Https:/ genetrail2.bioinf.uni-sb.de. Https:/ regulatortrail.bioinf.uni-sb.de. Ötzi the Iceman (ORA). Integrative / Comparative analysis. Wilms' tumors (mRNA miRNA). Statistical analysis of molecular signatures. Please insert your username or email address. Data and perform enrichment analysis based on gene sets derived from popular databases like GO. Data and perform enrichment analysis based on protein datasets like SMPDB. Or map proteins to corresponding genes and perform a gene set analysis.

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