GenomeMTV is an integrated analysis and visualization tool for microarray data. It supports tiling and expression arrays and provides statistical and analysis algorithms, including the polymorphism detection algorithm Tadpol. Synchronized multitrack visualizations encourage easy exploration and interpretation of the data. Instructions for installing GenomeMTV on your system. Learn how to load microarray data into GenomeMTV for analysis.
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The Institute for Genome Sciences
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801 W. ●●●●●●●ore St.
Bal●●●ore , MD, 21201
US
View this contact
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Bal●●●ore , MD, 21201
US
View this contact
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GenomeMTV is an integrated analysis and visualization tool for microarray data. It supports tiling and expression arrays and provides statistical and analysis algorithms, including the polymorphism detection algorithm Tadpol. Synchronized multitrack visualizations encourage easy exploration and interpretation of the data. Instructions for installing GenomeMTV on your system. Learn how to load microarray data into GenomeMTV for analysis.
genomemtv.org
Getting Started
http://www.genomemtv.org/Getting_Started.html
The first time you launch GenomeMTV, you’ll see an empty Project Manager. You’ll need create a GenomeMTV Project and load your data. Click New to create the project. GenomeMTV will ask what type of project you want to create, either a Tiling Array or Gene Expression analysis. After selecting your project type, click Continue . The QC Image dialog will appear again. This time, you should select No unless you added additional chips to the project. You’ll be asked to select the probe sets for a single seque...
Download
http://www.genomemtv.org/Download.html
GenomeMTV is free for academic use. Click here. To request a registration code or contact us at registration@genomemtv.org. For additional licensing options. GenomeMTV version 1.1. June 18, 2009. Http:/ cran.r-project.org/bin/macosx/old/R-2.8.1.dmg. Once R is installed, you can launch GenomeMTV by double clicking on genomeMTV.app in the Applications directory. See Getting Started. For information on loading your data into GenomeMTV.
Expression array Analysis
http://www.genomemtv.org/Expression.html
The chip display lets you visually inspect the microarray quality by displaying the probe intensities by their spatial positions on the microarray. Chips with spatial artifacts (cracks, smears, distortions), should be removed from the analysis. The side menu allows you to select between the different CEL files. The parallel coordinates plot displays the change in intensity over the chips, such as in a time series analysis. Each gene is drawn as a polyline, and each microarray is represented by equall...
Tiling Array Analysis
http://www.genomemtv.org/Tiling.html
At the top of the control panel is a popup menu for selecting the sequence (chromosome, plasmid 1, plasmid 2, .) as configured in the new project wizard. Next is a menu of tracks to display. Clicking in the checkbox next to each item toggles its display in the Main Display. The tracks are displayed in the Main Display in the same order as they are listed in the display tracks menu. Choice displays a density plot of the distribution of signal intensities. (See Density Plot below). The available plots are:.
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GenomeMTV is an integrated analysis and visualization tool for microarray data. It supports tiling and expression arrays and provides statistical and analysis algorithms, including the polymorphism detection algorithm Tadpol. Synchronized multitrack visualizations encourage easy exploration and interpretation of the data. Instructions for installing GenomeMTV on your system. Learn how to load microarray data into GenomeMTV for analysis.
Main Page - Genomemuseum.com
What is the Genome Museum. Viewing your genetics family. A brief guide to genomics from NHGRI. Interesting things in your Genome. Compare your genome with other people's. The principle of universal genome. Fully sequenced human genomes. Fully sequenced female human genome. Human Y chromosome genomics. Genomics Major Paper Publication. Your writing contribution to Genomics. Daphnia Genomics Consortium (DGC). Rice Genome at BGI China. TigerGenome Project by PGI Korea. PGP Personal Genome Project. Genomics ...
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10,000 Korean Human Genome Project. Ancient East Asian Genomes. Korean page: genomekorea.kr. Retrieved from " http:/ www.genomemuseum.net/index.php/Main Page. Related Links [ Edit. This page was last modified on 22 December 2017, at 05:57. This page has been accessed 2,915,504 times. Content is available under BioLicense: the freest license.
Main Page - Genomemuseum.org
What is Genome Museum? Getting your own Genome. Possible genomic diseases of you. Storing your genome in you PC. Viewing your genetics family. A brief guide to genomics from NHGRI. Interesting things in your Genome. Compare your genome with other people's. The principle of universal genome. Fully sequenced human genomes. Fully sequenced female human genome. Human Y chromosome genomics. Genomics Major Paper Publication. Your writing contribution to Genomics. Daphnia Genomics Consortium (DGC). Brief guide ...
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