glycoviewer.babs.unsw.edu.au

Glycoviewer - A Glycan visualisation tool

Glycoviewer - A Glycan Visualisation tool. This tool is a visualisation designed to present a set of glycan structures in a concise form, without presenting an overwhelming amount of information. The tool takes advantage of the nature of the biosynthetic pathways used to synthesise the structures, and focuses on presenting information where there are unique features in the structure. By de-emphasising a lot of the conserved structural features, it becomes easier to see the features that are unique. For p...

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Glycoviewer - A Glycan visualisation tool | glycoviewer.babs.unsw.edu.au Reviews

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Glycoviewer - A Glycan Visualisation tool. This tool is a visualisation designed to present a set of glycan structures in a concise form, without presenting an overwhelming amount of information. The tool takes advantage of the nature of the biosynthetic pathways used to synthesise the structures, and focuses on presenting information where there are unique features in the structure. By de-emphasising a lot of the conserved structural features, it becomes easier to see the features that are unique. For p...

<META> KEYWORDS

1 sample uses

2 use the tool

3 interpreting output

4 introduction

5 ruby on rails

6 mochikit

7 and the yui

8 javascript libraries

9 using the tool

10 important compatibility information

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sample uses,use the tool,interpreting output,introduction,ruby on rails,mochikit,and the yui,javascript libraries,using the tool,important compatibility information,or safari

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Glycoviewer - A Glycan visualisation tool | glycoviewer.babs.unsw.edu.au Reviews

https://glycoviewer.babs.unsw.edu.au

Glycoviewer - A Glycan Visualisation tool. This tool is a visualisation designed to present a set of glycan structures in a concise form, without presenting an overwhelming amount of information. The tool takes advantage of the nature of the biosynthetic pathways used to synthesise the structures, and focuses on presenting information where there are unique features in the structure. By de-emphasising a lot of the conserved structural features, it becomes easier to see the features that are unique. For p...

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glycoviewer.babs.unsw.edu.au

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Glycoviewer - A Glycan visualisation tool

http://www.glycoviewer.babs.unsw.edu.au/help_output

This help page is also available in PDF format here. How to Interpret the Output. The tool produces a complex figure, which summarises all relevant features of a set of glycan structures. For example, this figure summarises the structures of 640 N-linked glycans, from human tissue. Linkages between core residues are given as black lines, labeled with anomer and ring substitution position (e.g. the β1-4 linkage, see below). Linkages in chains have thick, coloured linking connections (e.g&#...The vividness...

2

Glycoviewer - A Glycan visualisation tool

http://www.glycoviewer.babs.unsw.edu.au/structures

The tool can be used to summarise small to large groups of structures. These can be from one protein, or a group of related or unrelated proteins from one or more tissues. Groups of structures from two or more species can also be compared. The following diagrams have been selected to illustrate the tool. Human cancer cell line. Compare human cancer cell line to tissue data.

3

Glycoviewer - A Glycan visualisation tool

http://www.glycoviewer.babs.unsw.edu.au/sequence_sets/add.html

Glycoviewer - A Glycan Visualisation tool. This tool is a visualisation designed to present a set of glycan structures in a concise form, without presenting an overwhelming amount of information. The tool takes advantage of the nature of the biosynthetic pathways used to synthesise the structures, and focuses on presenting information where there are unique features in the structure. By de-emphasising a lot of the conserved structural features, it becomes easier to see the features that are unique. For p...

4

Glycoviewer - A Glycan visualisation tool

http://www.glycoviewer.babs.unsw.edu.au/sequence_sets/add.xhtml

The tool produces a diagram that summarises a user-specified set of glycan structures. Sets of structures can be specified via the Sugar Builder. This is handy if you don’t know the IUPAC nomenclature. Alternatively, sets of structures in IUPAC format can be provided as a list. Once the set of structures has been entered, press the ‘Build Summary’ button. Drag and drop to build a structure. If you wish to delete residues, simply hold down SHIFT and left-click on the residue you wish to delete. Man(a1-2)M...

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expasy.org

ExPASy: SIB Bioinformatics Resource Portal - Categories

http://www.expasy.org/proteomics/mass_spectrometry_and_2-DE_data

Query within a category:. Query a specific database:. Protein sequences and identification. Sequence sites, features and motifs. No support from the ExPASy Team). Bull; MIAPE document edition • [more]. Bull; proteins on 2-D and SDS PAGE maps • [more]. Bull; set of 2DPAGE resources • [more]. Bull; gel-based proteomics data • [more]. Bull; World-2DPAGE is a public repository, standards compliant, for gel-based proteomics data published in the literature [less]. Bull; Protein identification by amino acid co...

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glycoviewer.babs.unsw.edu.au

Glycoviewer - A Glycan visualisation tool

Glycoviewer - A Glycan Visualisation tool. This tool is a visualisation designed to present a set of glycan structures in a concise form, without presenting an overwhelming amount of information. The tool takes advantage of the nature of the biosynthetic pathways used to synthesise the structures, and focuses on presenting information where there are unique features in the structure. By de-emphasising a lot of the conserved structural features, it becomes easier to see the features that are unique. For p...

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