University of Göttingen. Faculty of Biology and Psychology. Institute of Microbiology and Genetics. Gobics.de [Department of Bioinformatics]. Institut für Mikrobiologie und Genetik. Phone: 49 (551) 39-14966. Fax: 49 (551) 39-14929. Center for Informatics (ZfI). Center for Statistics (ZfS). Göttingen Center for Molecular Biosciences (GZMB). Courant Research Center Geobiology.
http://www.gobics.de/
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gobics.de: Department of Bioinformatics | gobics.de Reviews
https://gobics.de
University of Göttingen. Faculty of Biology and Psychology. Institute of Microbiology and Genetics. Gobics.de [Department of Bioinformatics]. Institut für Mikrobiologie und Genetik. Phone: 49 (551) 39-14966. Fax: 49 (551) 39-14929. Center for Informatics (ZfI). Center for Statistics (ZfS). Göttingen Center for Molecular Biosciences (GZMB). Courant Research Center Geobiology.
Orthoselect has ceased to exist.
The orthoselect server has been shut down for good. Sorry!
Orphelia - Metagenomic ORf FINder
Orphelia predicts genes in DNA fragments from species that were not included in the training set with good accuracy, and in particular, with a high specificity. 1] K J. Hoff, M. Tech, T. Lingner, R. Daniel, B. Morgenstern, P. Meinicke (2008) Gene prediction in metagenomic fragments: a large scale machine learning approach. 2] K J. Hoff, T. Lingner, P. Meinicke, M. Tech (2009) Orphelia: predicting genes in metagenomic sequencing reads Nucleic Acids Research.
MarVis Homepage
The MarVis-Suite: Marker Visualization, Filtering, Clustering, and Functional Analysis. The MarVis-Suite software is free for academic use. It comes with no guarantee or warranty at all. Use it at your own risk. Please send questions, bug reports and feature requests to marvis(AT)gobics(DOT)de. MarVis-Suite 2.0: MarVis-Filter, MarVis-Cluster, and MarVis-Pathway (2014) [1]. Currently, the MarVis-Suite 2.0. Install package for Windows XP/Vista/7/8 (397 MB). The MarVis-Suite 1.0. The MarVis-Suite 1.0. Downl...
Jumping Profile HMM (jpHMM)
Institute of Microbiology and Genetics. JpHMM (jumping profile Hidden Markov Model) is a probabilistic approach to compare a sequence to a multiple alignment of a sequence family. The jpHMM web server at GOBICS is a tool for the detection of recombinations in HIV-1. And hepatitis B virus (HBV). For information about the output format please see the online submission. New application of jpHMM:. Recombination detection in viruses with circular genomes such as HBV:. The source code can be downloaded here.
DIALIGN-TX: Multiple Sequence Alignment
Inst of Microbiology and Genetics. DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment. By Amarendran R. Subramanian. DIALIGN-TX is a substantial improvement of DIALIGN-T that combines greedy and progressive alignment strategies in a new algorithm which is now available for download. Further information can be found in:. Short outline of the algorithmic improvements. Benchmark results and construction of IRMBASE 2 and DIRMBASE 1. Further Information and Citation.
DIALIGN: home
University of GÃ ttingen. Inst of Microbiology and Genetics. Dialign 2.2.1 - Welcome. This is the new homepage of the DIALIGN multiple-alignment program at Göttingen Bioinformatics Compute Server (GOBICS). If you use DIALIGN. Please cite this paper:. L Al Ait, Z. Yamak, B. Morgenstern (2013). DIALIGN at GOBICS - multiple sequence alignment using various sources of external information. Several versions of DIALIGN are available online at GOBICS:. Alignments can now be visualized using the new tool ABC.
CoMet: home
CoMet a web-server for fast comparative functional profiling of metagenomes. CoMet allows you to compare the metabolic potential of metagenomes in terms of Pfam. Protein domains and the associated Gene Ontology. GO) terms. Our server implements a complete pipeline for functional profiling of multiple metagenomes: starting with an upload of multi-FASTA DNA sequence files (ideally one metagenome per file), subsequent ORF-finding is combined with a (very! For more information please refer to:.
Augustus: gene prediction
University of Göttingen. Institute of Microbiology and Genetics. Please use our new server at the University of Greifswald. It is much faster and uses the newest release of AUGUSTUS.
UProC - tools for ultra-fast protein sequence classification
UProC - tools for ultra-fast protein sequence classification. UProC command-line tools and C library. Version 1.2.0. Section below you find the links for the corresponding database files that we have precompiled for import into UProC. UProC: tools for ultra-fast protein domain classification. Asshauer, K. P. and Wemheuer, B. and Daniel, R. and Meinicke, P. Predicting functional profiles from metagenomic 16S rRNA data. Landesfeind, Manuel and Meinicke, Peter. International Journal of Molecular Sciences.
CoMet-Universe: Home
CoMet-Universe — a web-server for comparative analysis of metagenomes based on protein domain signatures. The CoMet-Universe server allows you to analyze the taxonomic and functional composition of your metagenomic sample and to compare it with a large collection of publicly available data from previous metagenome studies. Metabolic profiling based on KEGG pathways. And taxon abundance estimation across all domains of life and viruses. For uploading very large datasets, comments or questions related to C...
gobics.de
gobics.de: Funding
http://gobics.de/department/funding
University of Göttingen. Faculty of Biology and Psychology. Institute of Microbiology and Genetics. Financial support comes from:. DFG Project MO 1048/1-1 Objective functions and optimization techniques for the segment-based sequence alignment. By B Morgenstern and S. Waack. Within DFG Priority Program SPP 1063. DFG Project MO 1048/7-3 A combined phylogenetic and palaeontological approach to resolve deep phylogenetic incongruences among Phylum Porifera. By G Wörheide. B Morgenstern, J. Reitner. DFG Proje...
gobics.de: Office
http://gobics.de/department/secretariat
University of Göttingen. Faculty of Biology and Psychology. Institute of Microbiology and Genetics. 49 551 39 14966. 49 551 39 14929. Britta [at] gobics.de. Mo-Fr 11:00 - 13:00 Uhr. Formale Vorgaben fà r Diplom- und BSc-/Masterarbeiten. Formulare fà r HiWi-Vertrà ge. Pdf, 305 k).
gobics.de: People
http://gobics.de/department/people
University of Göttingen. Faculty of Biology and Psychology. Institute of Microbiology and Genetics. Marcus Boden (MSc student). Thomas Dencker (PhD student). Sebastian Groà (MSc student). Lars Hahn (BSc student). Heiner Klingenberg (PhD student). Chris Leimeister (PhD student). Britta Leinemann ( Office. Rasmus Steinkamp (sys. admin.). Former members of the group.
gobics.de: Department of Bioinformatics
http://gobics.de/department.html
University of Göttingen. Faculty of Biology and Psychology. Institute of Microbiology and Genetics. Gobics.de [Department of Bioinformatics]. Institut für Mikrobiologie und Genetik. Phone: 49 (551) 39-14966. Fax: 49 (551) 39-14929. Center for Informatics (ZfI). Center for Statistics (ZfS). Göttingen Center for Molecular Biosciences (GZMB). Courant Research Center Geobiology.
gobics.de: Mario Stanke
http://gobics.de/mario
Gobics.de [ Mario Stanke ]. University of Göttingen. Institute of Microbiology and Genetics. Institut für Mikrobiologie und Genetik. Abteilung für Bioinformatik. Phone: 49 551 39 14926. Fax: 49 551 39-14929. This is my old homepage. Since July 2010 I am working as professor for Bioinformatics at the University of Greifswald. Research Interest ( more. Gene Finding in Eukaryotes. Coalescence Theory for Recombining Sequences. Algorithms for Next Generation Sequencing and RNA-Seq. Statistik für Biologen.
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TiCo - Download
http://tico.gobics.de/download.jsp
Free download of TiCo stand-alone version. Download Datasets (tarball, 12 MB). Linux release of TiCo - Complete package. The complete packages contain:. Jars of TiCo 2.1 and Log4j (plus Mail and Activation for the version with mail interface). Matlab Libraries for Linux. Matlab compiler generated program for Linux. Configuration files for Linux. Matlab visualization program with bash starter script. TiCo21 (all inclusive) - with mail interface. TiCo21 (all inclusive) - with mail interface. Gsf2coord: Con...
Dialign-Pfam
http://dialign-pfam.gobics.de/SequenceAlignment
Dialign-Pfam identifies possible domains in protein sequences by scanning the input sequences using HMMER against PFAM database. It then uses this information to align protein sequences using Dialign. Paste your sequences in multiple FASTA format:. Or, upload your sequences file in multiple FASTA format:. This website is free and open to all users and there is no login requirement. The Process may take some time. If you can't wait, you can return back after a while to the following Link:.
MarVis Homepage
http://marvis.gobics.de/marvis-graph
Tool has been developed for integrative analysis of metabolic and transcriptomic high-throughput data. The paper describing MarVis-Graph. Is currently in review. More information will be provided after acceptance. The MarVis-Graph software is free for academic use. It comes with no guarantee or warranty at all. Use it at your own risk. Please send questions, bug reports and feature requests to marvis(AT)gobics(DOT)de. It can directly be opened with MarVis-Graph. MarVis-Graph requires Java 7.
The TiCo algorithm
http://tico.gobics.de/algorithm.jsp
Classification of Candidate TIS Sequences. Our method is based on the analysis of candidate TIS sequences as obtained from the flanking regions of potential start codons. We implemented a clustering algorithm which performs an unsupervised classification of sequences according to. TIS and all other candidates within the same search range as. Starting with the above initial classification we iterate the following two successive steps:. Inhomogeneous second order probabilities models for the. TIS, all othe...
WeightsVis - Visualization of the weights matrix
http://tico.gobics.de/weights.jsp
Visualization of a weights matrix. WeightsVis-Visualization of the positional weights matrix (PWM) calculated by TiCo for E. coli. With the default parameters. The weights are provided with the TiCo-prediction (attached to the results-email for users of the web interface or written to the output directory of the stand-alone version). The tool WeightsVis is available from our download site. A short description of the usage is given in the README.
TiCo - Datasets and Results
http://tico.gobics.de/results.jsp
Download datasets (tarball, 12 MB). For all post processors, predictions of the tool GLIMMER2.02 were used for initial annotation of the coding regions. For the evaluation of the performance we compared the results of the post processors with the most reliable annotations available for the genomes of E. coli. NC 000913) this is a set of 854 genes from the EcoGene database. Rudd, 2000), with N-termini verified by protein sequencing. 2001) The set of 123 genes includes such annotations that were confirmed ...
Jumping Profile HMM (jpHMM)
http://jphmm.gobics.de/download
Institute of Microbiology and Genetics. The following archives contain all source code files to run jpHMM locally. It also includes the newly implemented circular version of jpHMM. JpHMM source code (Mar 2015): jpHMM.tar.gz. Matlab code for estimating the emission probabilities by linear classifier learning ( Bulla et al. Code for estimating the emission probabilities using a model-based information sharing protocol: src.zip. Pdf) of the jpHMM program. Or the PhD ( pdf. Or Diplom thesis ( pdf. A-K Schult...
TiCo 2.0 - TIS Correction
http://tico.gobics.de/submission
Please cite one of the publications. If you use TICO for your results. Direct your questions and comments to tico-info@gobics.de.
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GOBI COAL AND ENERGY LIMITED - Welcome to Gobi Coal & Energy Ltd
Gobi Coal and Energy. Welcome to Gobi Coal and Energy Ltd. Gobi Coal and Energy Ltd. (“Gobi Coal” or the “Company”) is an emerging coking coal producer based in Mongolia. Gobi Coal owns 100% of two open cut coal development projects in southwestern Mongolia. The Company's projects contain approximately 95 million tonnes of JORC reserves and 318 million tonnes of JORC resources. With the recent downturn in coal prices in Gobi Coal's target market of northern China, the Company's Shinejinst and Z...
Gobicode.com
What Are The Secrets To The Success Of Top Iphone Apps. Early 2009, Apple revealed that a list of top IPhone apps had over a billion downloads. That same year, the download margin blew over a billion bigger as Apple became the flagship download platform with a worth of two billions downloads on top apps under its belt. How would you like to make your budding app become an Apple sensation in just about a year? Other apps have earned about 800,000 downloads even close to a million downloads like the likes ...
Bicolano Social Network - goBicol.com
Welcome to the New and Improved goBicol.com online community for Bicolanos. Viewing 15 topics - 1 through 15 (of 5,038 total). Translation bicol to tagalog. In: A Helping Hand. 23 hours, 59 minutes ago. 1 week, 6 days ago. 2 weeks, 1 day ago. DO YOU NEED URGENT LOAN IF YES CONTACT US NOW. 3 weeks, 4 days ago. In: Health & Aid Section. 3 weeks, 6 days ago. DO YOU NEED URGENT LOAN IF YES CONTACT US NOW. Business Loans and Personal Loans. DO YOU NEED URGENT LOAN IF YES CONTACT US NOW. Asian Sun Dental Clinic.
Axia Mobile
Blog de gobicrogny - jbbbbbbbbbbb - Skyrock.com
Mot de passe :. J'ai oublié mon mot de passe. B v'la a tous seu ki look se blog c qoi ke vs me conaisé soit ke vs allé aprandre a me conaitre dc bonne visite n'ésité po a laché vos com sa fé tjr plaizir dc je vs di a é je vs ador tous. Mise à jour :. Abonne-toi à mon blog! Sa c ma petit cousine elle déchire c'est a base de coneri toute la journé bon b jesper que avec ton mec sa va continué qu'il ne vas pas te laché car sinon il aura a faire au MAYENS lol jtd bsxxxxxxxxxxxxxxxxxxxxxx. Ou poster avec :.
gobics.de: Department of Bioinformatics
University of Göttingen. Faculty of Biology and Psychology. Institute of Microbiology and Genetics. Gobics.de [Department of Bioinformatics]. Institut für Mikrobiologie und Genetik. Phone: 49 (551) 39-14966. Fax: 49 (551) 39-14929. Center for Informatics (ZfI). Center for Statistics (ZfS). Göttingen Center for Molecular Biosciences (GZMB). Courant Research Center Geobiology.
Gobicycle
旅好きな陸マイラーの日々の記録。旅行と写真と野球観戦…その他いろんなことについて書いてみます。 転職と初フルマラソン挑戦・・・. 写真は最後のランチを同僚がご馳走してくれました（笑）ありがとうございます。 で、新しいことといえば、先日の湘南国際マラソン。 で、そんな中、ひとりの野球ファンとしてプロ野球開幕について思うこと。 野球が被災者に勇気を与える・・・みたいなことを言ってる人が居ますが、. 頑張れ、新井会長！！ ここまで揺れなかったような･･･。 東京在住の平凡なサラリーマンであり、陸マイラーです。野球は阪神タイガースの大ファンです。その他、旅行の話や写真の話、日々の記録など…よろしくお願いします。 12300;旅行」テーマ. Powered by Blogger.
go bicycle
Bikes from the futur. To Pierre Menard, The Author of the Quixote. The best circular bike ever made, at UCSB, by a guy whose last name starts with W… or at least its it the top ten. Etant donné (bicycle machine) for Haflinger (Alpine horses). There is no way to go now. Find on covers and citations. Good bye my love! I 'll never forget all this trips we had together my old lady. So you want us to keep on the lane? We'll keep on when you'll keep it safe! 2°C and the straight ligne became a white lane.
gobicyclego (Sierra) | DeviantArt
Window.devicePixelRatio*screen.width 'x' window.devicePixelRatio*screen.height) :(screen.width 'x' screen.height) ; this.removeAttribute('onclick')". Deviant for 12 Years. Last Visit: 516 weeks ago. This deviant's activity is hidden. Deviant since Jun 4, 2005. This is the place where you can personalize your profile! By moving, adding and personalizing widgets. You can drag and drop to rearrange. You can edit widgets to customize them. The bottom has widgets you can add! We've split the page into zones!
Go Bicycle Touring | Find the Best Guided and Self-Guided Bike Tours in the World | Guided Bike Tour
Cycling discovering Mae Wang / Chiang Mai area – Tour 2. The highlight of the tour is cruising along small countryside roads with hardly traffic. Stopping at interesting villages and temples. We will pass through trad. Oct 01, 2017 - Mar 31, 2018. Algarve the Sun and the Sea. Known for it’s extensives beaches and golden cliffs, we cycle trough an Algarve full of history, from it’s Arab past to it’s importance on the. Nov 12, 2017 - Nov 18, 2017. The Alentejo Vineyards Colours. Aug 27, 2017 - Sep 02, 2017.
Go Bicycle Touring! – Guide to the web's Best Bicycle Touring Blogs and Resources.
Guide to the web's Best Bicycle Touring Blogs and Resources. Traveling Eurasia By Bike to Find Issues that Matter. Recent college graduates Morgan Hartley and Chris Walker aren’t your average cycle tourists. They’re citizen journalists on a quest to explore our planet and share the stories of the people they encounter along the way. Spend just a few. October 14, 2013. October 14, 2013. Asia Bicycle Touring Blogs. October 14, 2013. October 14, 2013. North America Bicycle Touring Blogs. April 25, 2013.
