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xGDBvm - Project Home

GDB001 PdomGDB r1.2 -. GDB002 C.rubella genome annotation -. GDB003 Musa acuminata contig 839 -. All Help Resources -. Project Home Page for xGDB vm. A virtual environment for viewing and annotating genomes. XGDBvm is a genome annotation platform that allows any researcher to annotate a genome and view/analyze the output using a Web-based graphical user interface (GUI). xGDBvm is hosted on iPlant's Atmosphere Cloud Services. And is available to anyone who registers for an iPlant account.

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xGDBvm - Project Home | goblinx.soic.indiana.edu Reviews
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GDB001 PdomGDB r1.2 -. GDB002 C.rubella genome annotation -. GDB003 Musa acuminata contig 839 -. All Help Resources -. Project Home Page for xGDB vm. A virtual environment for viewing and annotating genomes. XGDBvm is a genome annotation platform that allows any researcher to annotate a genome and view/analyze the output using a Web-based graphical user interface (GUI). xGDBvm is hosted on iPlant's Atmosphere Cloud Services. And is available to anyone who registers for an iPlant account.
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3 licensing
4 who we are
5 genomes
6 getting started
7 current genomes
8 genome statistics
9 annotate
10 gdb001 community central
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xGDBvm - Project Home | goblinx.soic.indiana.edu Reviews

https://goblinx.soic.indiana.edu

GDB001 PdomGDB r1.2 -. GDB002 C.rubella genome annotation -. GDB003 Musa acuminata contig 839 -. All Help Resources -. Project Home Page for xGDB vm. A virtual environment for viewing and annotating genomes. XGDBvm is a genome annotation platform that allows any researcher to annotate a genome and view/analyze the output using a Web-based graphical user interface (GUI). xGDBvm is hosted on iPlant's Atmosphere Cloud Services. And is available to anyone who registers for an iPlant account.

INTERNAL PAGES

goblinx.soic.indiana.edu goblinx.soic.indiana.edu
1

About xGDBvm

http://goblinx.soic.indiana.edu/project/index.php

GDB001 PdomGDB r1.2 -. GDB002 C.rubella genome annotation -. GDB003 Musa acuminata contig 839 -. GDB004 Example 4 - CpGAT Option -. GDB005 Example 3 - Pre-Computed Alignments -. All Help Resources -. Is a virtual genome annotation platform that allows any researcher to annotate a genome and view/analyze the output using a Web-based graphical user interface (GUI). Based on PlantGDB. Its core is a modified and extended version of the xGDB. Using their Atmosphere Cloud Services. How does it work? Re-annotat...

2

start [WikiXGDB]

http://goblinx.soic.indiana.edu/wiki/doku.php

For users of the xGDBvm tool, deployed at iPlant/CyVerse. XGDBvm is developed and maintained by the Brendel Group. Need a CyVerse account? Log in to Discovery Environment. XGDBvm is a virtual machine (VM) platform for annotating and displaying eukaryotic genomes. xGDBvm can be deployed on demand by registered CyVerse users on the Atmosphere. For data processing. All subsequent steps are accomplished over a secure Web connection to the VM. See also Overview. Access to high performance computing ( HPC.

3

Community Annotation - Overview

http://goblinx.soic.indiana.edu/src/yrGATE

Set Up Site Name. Set Up Admin Email. Config: GDB001 PdomGDB r1.2-. Config: GDB002 C.rubella genome annotation-. Config: GDB003 Musa acuminata contig 839-. Config: GDB004 Example 4 - CpGAT Option-. Config: GDB005 Example 3 - Pre-Computed Alignments-. GDB001 PdomGDB r1.2 -. GDB002 C.rubella genome annotation -. GDB003 Musa acuminata contig 839 -. GDB004 Example 4 - CpGAT Option -. GDB005 Example 3 - Pre-Computed Alignments -. All Help Resources -. Your xGDBvm instance is NOT password-protected! You or ano...

4

Videos

http://goblinx.soic.indiana.edu/XGDB/help/video_tutorials.php

Set Up Site Name. Set Up Admin Email. Config: GDB001 PdomGDB r1.2-. Config: GDB002 C.rubella genome annotation-. Config: GDB003 Musa acuminata contig 839-. Config: GDB004 Example 4 - CpGAT Option-. Config: GDB005 Example 3 - Pre-Computed Alignments-. GDB001 PdomGDB r1.2 -. GDB002 C.rubella genome annotation -. GDB003 Musa acuminata contig 839 -. GDB004 Example 4 - CpGAT Option -. GDB005 Example 3 - Pre-Computed Alignments -. All Help Resources -. Your xGDBvm instance is NOT password-protected!

5

Current Genomes - Overview

http://goblinx.soic.indiana.edu/XGDB/genomes.php

Set Up Site Name. Set Up Admin Email. Config: GDB001 PdomGDB r1.2-. Config: GDB002 C.rubella genome annotation-. Config: GDB003 Musa acuminata contig 839-. Config: GDB004 Example 4 - CpGAT Option-. Config: GDB005 Example 3 - Pre-Computed Alignments-. GDB001 PdomGDB r1.2 -. GDB002 C.rubella genome annotation -. GDB003 Musa acuminata contig 839 -. GDB004 Example 4 - CpGAT Option -. GDB005 Example 3 - Pre-Computed Alignments -. All Help Resources -. Your xGDBvm instance is NOT password-protected!

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plantgdb.org plantgdb.org

PlantGDB News

http://www.plantgdb.org/site/news.php

AtGDB - Arabidopsis thaliana. BrGDB - Brassica rapa. CpGDB - Carica papaya. CsGDB - Cucumis sativus. GhGDB - Gossypium hirsutum. GmGDB - Glycine max. LjGDB - Lotus japonicus. MeGDB - Manihot esculenta. MtGDB - Medicago truncatula. MgGDB - Mimulus guttatus. PeGDB - Prunus persica. PtGDB - Populus trichocarpa. RcGDB - Ricinus communis. SlGDB - Solanum lycopersicum. StGDB - Solanum tuberosum. VvGDB - Vitis vinifera. BdGDB - Brachypodium distachyon. HvGDB - Hordeum vulgare. OsGDB - Oryza sativa. July 1, 2015).

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All Tutorials | iPlant Collaborative

http://www.iplantc.org/learning-center/all-tutorials

Skip to main content. This is a debugging block. Bisque Image Analysis Environment. Taxonomic Name Resolution Service (TNRS). This is a debugging block. This is a debugging block. This is a debugging block. This is a debugging block. Upcoming Events and Workshops. Published scientific use examples. Bioinformatics tools (list under Other ). Cluster and Report Homologs. Genotyping by sequencing (GBS). Statistical expression analysis tools. This is a debugging block. Learning Center Science Tutorials. Submi...

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xGDBvm - Project Home

GDB001 PdomGDB r1.2 -. GDB002 C.rubella genome annotation -. GDB003 Musa acuminata contig 839 -. All Help Resources -. Project Home Page for xGDB vm. A virtual environment for viewing and annotating genomes. XGDBvm is a genome annotation platform that allows any researcher to annotate a genome and view/analyze the output using a Web-based graphical user interface (GUI). xGDBvm is hosted on iPlant's Atmosphere Cloud Services. And is available to anyone who registers for an iPlant account.

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Goblin XNA - Home

Project Hosting for Open Source Software. By clicking Delete, all history, comments and attachments for this page will be deleted and cannot be restored. Change History (all pages). Goblin XNA is a platform for research on 3D user interfaces, including mobile augmented reality and virtual reality, with an emphasis on games. It is written in C# and based on Microsoft XNA Game Studio 3.1 (up to Goblin XNA v3.6) and 4.0 (after Goblin XNA v4.0). The latest stable release is Goblin XNA v4.1. Here are the vide...

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GoblinZ

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