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GoMapMan | GoMapMan.org

Skip to main content. GoMapMan is an open web-accessible resource for gene functional annotations in the plant sciences. It was developed to facilitate improvement, consolidation and visualization of gene annotations across several plant species. GoMapMan is based on the plant specific MapMan ontology. In the formats suitable for direct use with other tools (namely MapMan, GSEA, BioMine or SEGS). Ramšak Ž, Baebler Š, Rotter A, Korbar M, Mozetič I, Usadel B and Gruden K. (2014). GoMapMan: integrat...GoMap...

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Skip to main content. GoMapMan is an open web-accessible resource for gene functional annotations in the plant sciences. It was developed to facilitate improvement, consolidation and visualization of gene annotations across several plant species. GoMapMan is based on the plant specific MapMan ontology. In the formats suitable for direct use with other tools (namely MapMan, GSEA, BioMine or SEGS). Ramšak Ž, Baebler Š, Rotter A, Korbar M, Mozetič I, Usadel B and Gruden K. (2014). GoMapMan: integrat...GoMap...
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GoMapMan | GoMapMan.org | gomapman.org Reviews

https://gomapman.org

Skip to main content. GoMapMan is an open web-accessible resource for gene functional annotations in the plant sciences. It was developed to facilitate improvement, consolidation and visualization of gene annotations across several plant species. GoMapMan is based on the plant specific MapMan ontology. In the formats suitable for direct use with other tools (namely MapMan, GSEA, BioMine or SEGS). Ramšak Ž, Baebler Š, Rotter A, Korbar M, Mozetič I, Usadel B and Gruden K. (2014). GoMapMan: integrat...GoMap...

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gomapman.org gomapman.org
1

Exports | GoMapMan.org

http://www.gomapman.org/export/current

Skip to main content. Exports of gene identifiers and microarray features for individual species are available for import to BioMine. Date of the last export. Creation is 14 Mar 2017.

2

Help | GoMapMan.org

http://www.gomapman.org/node/2

Skip to main content. Genes of different organisms can be visualized by checking their respective checkboxes. Rice: MSU v7 (Rice Genome Annotation Project, Release 7). Potato: stNIB-v1 (combining PGSC Gene Model v3.4, ITAG Potato Gene Model v.1, POCI and StGIv13). Tomato: ITAG Tomato Gene Models (v2.3), assembly SL2.40, annotation ITAG2.3. Select ortholog grouping based on two ortholog groupings:. PGSCorthoMCL: clustering of proteins of 12 plant species with the orthoMCL algorithm ( PGSC, 2011. Last modi...

3

User account | GoMapMan.org

http://www.gomapman.org/user

Skip to main content. Log in (active tab). Gene position editing is reserved for collaborators only. Minor changes can be implemented by NIB curators upon request. For username requests, write to us at gomapman@nib.si. Specifying your scientific background and motivation for curation and we will inform you about training possibilities. Enter your GoMapMan.org username. Enter the password that accompanies your username.

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Skip to main content. GoMapMan is an open web-accessible resource for gene functional annotations in the plant sciences. It was developed to facilitate improvement, consolidation and visualization of gene annotations across several plant species. GoMapMan is based on the plant specific MapMan ontology. In the formats suitable for direct use with other tools (namely MapMan, GSEA, BioMine or SEGS). Ramšak Ž, Baebler Š, Rotter A, Korbar M, Mozetič I, Usadel B and Gruden K. (2014). GoMapMan: integrat...GoMap...

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