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Biomolecular Simulation - The GROMOS Software

Biomolecular Simulation - GROMOS software

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Laboratory of Physical Chemistry ETH

Wilfred F. van Gunsteren

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Laboratory of Physical Chemistry ETH

Wilfred F. van Gunsteren

Hoeng●●●●●rg HC

Zu●●ch , Switzerland, 8093

CH

41.7●●●●0540
wf●●●@igc.phys.chem.ethz.ch

View this contact

Laboratory of Physical Chemistry ETH

Wilfred F. van Gunsteren

Hoeng●●●●●rg HC

Zu●●ch , Switzerland, 8093

CH

41.7●●●●0540
wf●●●@igc.phys.chem.ethz.ch

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Biomolecular Simulation - The GROMOS Software | gromos.net Reviews
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Biomolecular Simulation - The GROMOS Software | gromos.net Reviews

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Biomolecular Simulation - GROMOS software

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1

Biomolecular Simulation - The GROMOS Software

http://www.gromos.net/main.pl

How to get GROMOS. Please enter your E-mail address and password below. GROMOS - Software for Biomolecular Simulation.

2

Biomolecular Simulation - The GROMOS Software

http://www.gromos.net/page.pl?page=about

How to get GROMOS. About the GROMOS software for biomolecular simulation. GROMOS™ is an acronym of the GROningen MOlecular Simulation computer program package, which has been developed since 1978 for the dynamic modelling of (bio)molecules, until 1990 at the University of Groningen, The Netherlands, and since then at the ETH, the Swiss Federal Institute of Technology, in Zürich, Switzerland. Its development was driven by the research group of Wilfred van Gunsteren. At the ETH, of Chris Oostenbrink. The G...

3

Biomolecular Simulation - The GROMOS Software

http://www.gromos.net/page.pl?page=howtoget

How to get GROMOS. Distribution and Licencing of GROMOS. Upon registration as a GROMOS user the GROMOS C source codes MD and GROMOS , the GROMOS manuals (Vol 1-9) and user guide, the example files belonging to Volume 7, and various GROMOS force-field files become downloadable. GROMOS - Software for Biomolecular Simulation.

4

Biomolecular Simulation - The GROMOS Software

http://www.gromos.net/useradm.pl?page=login

How to get GROMOS. Please enter your E-mail address and password below. GROMOS - Software for Biomolecular Simulation.

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crdd.imtech.res.in crdd.imtech.res.in

Chemical Structure Optimization

http://crdd.imtech.res.in/optim.php

Data on M.tb. The molecules physiochemical properties are depends upon specific conformation. Thus suitable multi-conformer stuctures (2D/3D) of compounds to facilitate to selecting desired compounds. There are several tools are available to generate 2D/3D structure/conformers. List of stoftware and web servers used for structure optimization of molecules:. SMI23D (3D Cordinate Generation) program converts one or more SMILIES strings into 3D. It is based on the multi-objective evolution algorithm which i...

smmb.usc.es smmb.usc.es

Soft Matter & Molecular Biophysics Web Site

http://smmb.usc.es/tools.html

Soft Matter and Molecular Biophysics Group. Scripted Utility to Get Atomic Resolution by Positional Interpolation/Extrapolation. FOR THE IMPATIENTS (it is really easy): Click HERE. To start the current version of SUGAR-PIE! Is an application developed and maintained by Ángel Piñeiro, designed for the easy mapping of lipid bilayers from coarse-grain (CG) to atomistic (AT) resolution based on an interpolation/extrapolation approach of atomic positions. At the moment only the MARTINI. Force field, the Berger.

alanine.usc.es alanine.usc.es

Soft Matter & Molecular Biophysics Web Site

http://alanine.usc.es/sugarpie/sugarpie.php

Soft Matter and Molecular Biophysics Group. Scripted Utility to Get Atomic Resolution by Positional Interpolation/Extrapolation. Is an application developed and maintained by Ángel Piñeiro, designed for the easy mapping of lipid bilayers from coarse-grain (CG) to atomistic (AT) resolution based on an interpolation/extrapolation approach of atomic positions. The current version works with lipid bilayers based on POPC and/or DPPC. At the moment only the MARTINI. Force field, the Berger. PLEASE, DO NOT INTR...

alanine.usc.es alanine.usc.es

Soft Matter & Molecular Biophysics Web Site

http://alanine.usc.es/tools.html

Soft Matter and Molecular Biophysics Group. Scripted Utility to Get Atomic Resolution by Positional Interpolation/Extrapolation. FOR THE IMPATIENTS (it is really easy): Click HERE. To start the current version of SUGAR-PIE! Is an application developed and maintained by Ángel Piñeiro, designed for the easy mapping of lipid bilayers from coarse-grain (CG) to atomistic (AT) resolution based on an interpolation/extrapolation approach of atomic positions. At the moment only the MARTINI. Force field, the Berger.

crdd.osdd.net crdd.osdd.net

Chemical Structure Optimization

http://crdd.osdd.net/optim.php

Data on M.tb. The molecules physiochemical properties are depends upon specific conformation. Thus suitable multi-conformer stuctures (2D/3D) of compounds to facilitate to selecting desired compounds. There are several tools are available to generate 2D/3D structure/conformers. List of stoftware and web servers used for structure optimization of molecules:. SMI23D (3D Cordinate Generation) program converts one or more SMILIES strings into 3D. It is based on the multi-objective evolution algorithm which i...

smmb.usc.es smmb.usc.es

Soft Matter & Molecular Biophysics Web Site

http://smmb.usc.es/sugarpie/sugarpie.php

Soft Matter and Molecular Biophysics Group. Scripted Utility to Get Atomic Resolution by Positional Interpolation/Extrapolation. Is an application developed and maintained by Ángel Piñeiro, designed for the easy mapping of lipid bilayers from coarse-grain (CG) to atomistic (AT) resolution based on an interpolation/extrapolation approach of atomic positions. The current version works with lipid bilayers based on POPC and/or DPPC. At the moment only the MARTINI. Force field, the Berger. PLEASE, DO NOT INTR...

espressomd.org espressomd.org

ESPResSo » Features

http://espressomd.org/wordpress/about/features

Uarr; Return to About. Can perform Molecular Dynamics. Simulations of bead-spring models in various ensembles (. It is optimized for coarse-grained models. And has the following characteristics:. Is controlled by a scripting language. Soon: Python), which gives it its gerate flexibility. Which allows users to add new methods and algorithms. Is open-source and free. License: GPL (GNU General Public License). Ie it can run on many processors in parallel. Contains a number of advanced algorithms. Which is a...

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