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Welcome to my personal website. My name is Foivos Gypas and I come from the beautiful island of Corfu. I am an Electronic and Computer Engineer and member of TEE. Technical Chamber of Greece). I received my 5-year diploma from the department of Electronic and Computer Engineering. Of Technical University of Crete. Under the supervision of Professor Michalis Zervakis. I also hold a M.Sc. Bioinformatics. From the Faculty of Biology. Of National and Kapodistrian University of Athens.

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Welcome to my personal website. My name is Foivos Gypas and I come from the beautiful island of Corfu. I am an Electronic and Computer Engineer and member of TEE. Technical Chamber of Greece). I received my 5-year diploma from the department of Electronic and Computer Engineering. Of Technical University of Crete. Under the supervision of Professor Michalis Zervakis. I also hold a M.Sc. Bioinformatics. From the Faculty of Biology. Of National and Kapodistrian University of Athens.

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Welcome to my personal website. My name is Foivos Gypas and I come from the beautiful island of Corfu. I am an Electronic and Computer Engineer and member of TEE. Technical Chamber of Greece). I received my 5-year diploma from the department of Electronic and Computer Engineering. Of Technical University of Crete. Under the supervision of Professor Michalis Zervakis. I also hold a M.Sc. Bioinformatics. From the Faculty of Biology. Of National and Kapodistrian University of Athens.

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How to install FASTX TOOLKIT in a machine without admin privileges | Foivos Gypas

http://gypas.com/archives/491

MacPorts or Homebrew on Mavericks for bioinformatics? How to install FASTX TOOLKIT in a machine without admin privileges. Lets say we want to install the new version of FASTX Toolkit (v 0.0.14) and we don’t have admin privileges. First of all we download in a directory the libgtexutils and the fastx toolkit:. Https:/ github.com/agordon/libgtextutils/releases/download/0.7/libgtextutils-0.7.tar.gz. Libgtextutils-0.7 (which you uncompressed). Fastx toolkit-0.0.14 (which you uncompressed). Now you will have ...

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Blog | Foivos Gypas | My personal website

http://gypas.com/blog

How to install FASTX TOOLKIT in a machine without admin privileges. Lets say we want to install the new version of FASTX Toolkit (v 0.0.14) and we don’t have admin privileges. First of all we download in a directory the libgtexutils and the fastx toolkit:. Https:/ github.com/agordon/libgtextutils/releases/download/0.7/libgtextutils-0.7.tar.gz. Https:/ github.com/agordon/fastx toolkit/releases/download/0.0.14/fastx toolkit-0.0.14.tar.bz2. Libgtextutils-0.7 (which you uncompressed). And source your bashrc.

3

mpMoRFsDB: A database of molecular recognition features in membrane proteins. | Foivos Gypas

http://gypas.com/archives/417

Do we really need pattern matching? MpMoRFsDB v1.1 →. MpMoRFsDB: A database of molecular recognition features in membrane proteins. MpMoRFsDB was accepted for publication at Bioinformatics. Really glad about this. I would like to thank the co-authors Phd candidate George N. Tsaousis. And Professor Stavros J. Hamodrakas. You can access the database at http:/ bioinformatics.biol.uoa.gr/mpMoRFsDB/. More info soon…. This entry was posted in bioinformatics. Do we really need pattern matching?

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Do we really need pattern matching? | Foivos Gypas

http://gypas.com/archives/411

Doubly linked list with binary search tree. MpMoRFsDB: A database of molecular recognition features in membrane proteins. →. Do we really need pattern matching? We use Perl because of its pattern matching feature. But in a world where more (biological) XML data are generated, it’s easier to drop pattern matching (and perl) and use other languages. A combination of Python with XPath (especially) seems wiser. File is way better to use Xpath than doing a laborious pattern matching.

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mpMoRFsDB v1.1 | Foivos Gypas

http://gypas.com/archives/474

MpMoRFsDB: A database of molecular recognition features in membrane proteins. MacPorts or Homebrew on Mavericks for bioinformatics? Is now on version 1.1. An update was performed in order to correct mappings as annotations at PDB and Uniprot altered. This entry was posted in bioinformatics. MpMoRFsDB: A database of molecular recognition features in membrane proteins. MacPorts or Homebrew on Mavericks for bioinformatics? How to install FASTX TOOLKIT in a machine without admin privileges.

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Welcome to my personal website. My name is Foivos Gypas and I come from the beautiful island of Corfu. I am an Electronic and Computer Engineer and member of TEE. Technical Chamber of Greece). I received my 5-year diploma from the department of Electronic and Computer Engineering. Of Technical University of Crete. Under the supervision of Professor Michalis Zervakis. I also hold a M.Sc. Bioinformatics. From the Faculty of Biology. Of National and Kapodistrian University of Athens.

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