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Useful functions and commands

Useful functions and commands. Thursday, July 23, 2015. Notes on decrypting dbGaP datasets. 1 Install aspera download from http:/ downloads.asperasoft.com/downloads. Select aspera connect and then show all installers). 2 Download using aspera working exampole download gtex to tarbell 11/25/214 (this didn’t work, cri-syncmon.cri.uchicago.edu. 4 get repository key. Ncbi/dbGaP-6981/) - from the working directory created by the ugly vdb-config run vbd-decrypt cd /Users/ haky. Saturday, October 4, 2014. In ra...

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Useful functions and commands | haky-functions.blogspot.com Reviews
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Useful functions and commands. Thursday, July 23, 2015. Notes on decrypting dbGaP datasets. 1 Install aspera download from http:/ downloads.asperasoft.com/downloads. Select aspera connect and then show all installers). 2 Download using aspera working exampole download gtex to tarbell 11/25/214 (this didn’t work, cri-syncmon.cri.uchicago.edu. 4 get repository key. Ncbi/dbGaP-6981/) - from the working directory created by the ugly vdb-config run vbd-decrypt cd /Users/ haky. Saturday, October 4, 2014. In ra...
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1 3 download manifest
2 cd /users/ haky
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4 haky
5 no comments
6 print to pdf mysteries revealed
7 pages/help
8 inverse normalization function
9 qsub i
10 2 comments
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3 download manifest,cd /users/ haky,posted by,haky,no comments,print to pdf mysteries revealed,pages/help,inverse normalization function,qsub i,2 comments,set o emacs,1 comment,3 comments,labels awk,labels linux,trim white spaces,check,gsub,labels r code
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Useful functions and commands | haky-functions.blogspot.com Reviews

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Useful functions and commands. Thursday, July 23, 2015. Notes on decrypting dbGaP datasets. 1 Install aspera download from http:/ downloads.asperasoft.com/downloads. Select aspera connect and then show all installers). 2 Download using aspera working exampole download gtex to tarbell 11/25/214 (this didn’t work, cri-syncmon.cri.uchicago.edu. 4 get repository key. Ncbi/dbGaP-6981/) - from the working directory created by the ugly vdb-config run vbd-decrypt cd /Users/ haky. Saturday, October 4, 2014. In ra...

INTERNAL PAGES

haky-functions.blogspot.com haky-functions.blogspot.com
1

Useful functions and commands: Imputation QC and server

http://haky-functions.blogspot.com/2014/07/imputation-qc-and-server.html

Useful functions and commands. Thursday, July 3, 2014. Imputation QC and server. Http:/ genome.sph.umich.edu/wiki/IMPUTE2: 1000 Genomes Imputation Cookbook. Https:/ imputationserver.sph.umich.edu/start.html#! Subscribe to: Post Comments (Atom). Adding letter head to latex file. Imputation QC and server. R script to query UCSC database - RMySQL.

2

Useful functions and commands: Mining genomic databases with R

http://haky-functions.blogspot.com/2014/06/mining-genomic-databases-with-r.html

Useful functions and commands. Thursday, June 26, 2014. Mining genomic databases with R. Http:/ freshbiostats.wordpress.com/2013/02/23/mining-genomic-databases-with-r/. Subscribe to: Post Comments (Atom). Analysis of PubMed search results using R. Mining genomic databases with R. Statistical Genetics/Genomics Intro Material.

3

Useful functions and commands: How to install virtualenv

http://haky-functions.blogspot.com/2014/03/how-to-install-virtualenv.html

Useful functions and commands. Tuesday, March 18, 2014. How to install virtualenv. Subscribe to: Post Comments (Atom). How to create MySQL database with Entrez Gene Data. How to handle gzip files without decompressing. How to start interactive session on tarbell. How to install virtualenv. How to start shiny application.

4

Useful functions and commands: drop repeated vars keeping first row for given var

http://haky-functions.blogspot.com/2014/05/drop-repeated-vars-keeping-first-row.html

Useful functions and commands. Thursday, May 15, 2014. Drop repeated vars keeping first row for given var. Function # drop repeated vars but keeping first row for given var droprep = function(df,repvar,sortvar) { tab = table(df[,repvar]) nametab = names(tab) uniquelist = nametab[tab= 1] replist = nametab[tab 1] ind = df[,repvar] %in% uniquelist res = df[ind,] tempo = df[! Subscribe to: Post Comments (Atom). Drop repeated vars keeping first row for given var.

5

Useful functions and commands: How to start interactive session on tarbell

http://haky-functions.blogspot.com/2014/03/how-to-start-interactive-session-on.html

Useful functions and commands. Thursday, March 20, 2014. How to start interactive session on tarbell. Subscribe to: Post Comments (Atom). How to create MySQL database with Entrez Gene Data. How to handle gzip files without decompressing. How to start interactive session on tarbell. How to install virtualenv. How to start shiny application.

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quantitative-ecology.blogspot.com quantitative-ecology.blogspot.com

Quantitative Ecology: May 2014

http://quantitative-ecology.blogspot.com/2014_05_01_archive.html

Functions and tips for use in the R statistical environment. Friday, May 16, 2014. Sample uniformly within a fixed radius. I was asked how to do this today and thought that I would share the answer:. Sample points uniformly within a fixed radius. NB: To get a truly uniform sample over the circle, you must. Sample the square of the distance and then transform back. Pi) # convert Turning angle to bearing (in this case no change). Turningangle # Convert from polar to cartesian coordinates.

quantitative-ecology.blogspot.com quantitative-ecology.blogspot.com

Quantitative Ecology: May 2008

http://quantitative-ecology.blogspot.com/2008_05_01_archive.html

Functions and tips for use in the R statistical environment. Tuesday, May 6, 2008. In a recent post to r-sig-ecology, Mike Colvin suggested the following to capture errors within a loop:. Subscribe to: Posts (Atom). Saint Paul, MN, United States. Assistant Professor in the Department of Fisheries, Wildlife and Conservation Biology at the University of Minnesota - Twin Cities. Dropbox Referral. View my complete profile. Haky's R functions and Linux commands. Paul Johnson's R Page. Install R on Ubuntu.

quantitative-ecology.blogspot.com quantitative-ecology.blogspot.com

Quantitative Ecology: Sample uniformly within a fixed radius.

http://quantitative-ecology.blogspot.com/2014/05/sample-uniformly-within-fixed-radius.html

Functions and tips for use in the R statistical environment. Friday, May 16, 2014. Sample uniformly within a fixed radius. I was asked how to do this today and thought that I would share the answer:. Sample points uniformly within a fixed radius. NB: To get a truly uniform sample over the circle, you must. Sample the square of the distance and then transform back. Pi) # convert Turning angle to bearing (in this case no change). Turningangle # Convert from polar to cartesian coordinates.

imlab.uchicago.edu imlab.uchicago.edu

Now hiring pre and post doctoral candidates | Im-Lab | The University of Chicago

http://imlab.uchicago.edu/news/now-hiring-pre-and-post-doctoral-candidates

Skip to main navigation. Skip to main content. The University of Chicago. Now hiring pre and post doctoral candidates. H akyimlab github page. Office of International Affairs - H/J Visas. MetaXcan manuscript on bioRxiv. PrediXcan among top 3 in #TBICRI16/methods. Find our manuscript on genetic architecture of gene expression across tissues on BioRxiv. Find our Bipolar Disorder manuscript on BioRxiv. Multiple Openings in Genomic Data Science Lab. Published on Aug 20, 2015. Candidates with a multidisciplin...

imlab.uchicago.edu imlab.uchicago.edu

NIDA P50 Pilot Grant Awarded | Im-Lab | The University of Chicago

http://imlab.uchicago.edu/news/nida-p50-pilot-grant-awarded

Skip to main navigation. Skip to main content. The University of Chicago. NIDA P50 Pilot Grant Awarded. H akyimlab github page. Office of International Affairs - H/J Visas. MetaXcan manuscript on bioRxiv. PrediXcan among top 3 in #TBICRI16/methods. Find our manuscript on genetic architecture of gene expression across tissues on BioRxiv. Find our Bipolar Disorder manuscript on BioRxiv. Multiple Openings in Genomic Data Science Lab. Published on Jan 9, 2015. The University of Chicago. 900 East 57th Street.

imlab.uchicago.edu imlab.uchicago.edu

DRTC pilot grant awarded | Im-Lab | The University of Chicago

http://imlab.uchicago.edu/news/drtc-pilot-grant-awarded

Skip to main navigation. Skip to main content. The University of Chicago. DRTC pilot grant awarded. H akyimlab github page. Office of International Affairs - H/J Visas. MetaXcan manuscript on bioRxiv. PrediXcan among top 3 in #TBICRI16/methods. Find our manuscript on genetic architecture of gene expression across tissues on BioRxiv. Find our Bipolar Disorder manuscript on BioRxiv. Multiple Openings in Genomic Data Science Lab. Published on Feb 15, 2014. The University of Chicago. 900 East 57th Street.

imlab.uchicago.edu imlab.uchicago.edu

Find our Bipolar Disorder manuscript on BioRxiv | Im-Lab | The University of Chicago

http://imlab.uchicago.edu/news/find-our-bipolar-disorder-manuscript-biorxiv

Skip to main navigation. Skip to main content. The University of Chicago. Find our Bipolar Disorder manuscript on BioRxiv. H akyimlab github page. Office of International Affairs - H/J Visas. MetaXcan manuscript on bioRxiv. PrediXcan among top 3 in #TBICRI16/methods. Find our manuscript on genetic architecture of gene expression across tissues on BioRxiv. Find our Bipolar Disorder manuscript on BioRxiv. Multiple Openings in Genomic Data Science Lab. Published on Mar 22, 2016. The University of Chicago.

imlab.uchicago.edu imlab.uchicago.edu

Members and Collaborators | Im-Lab | The University of Chicago

http://imlab.uchicago.edu/directories/table/members-and-collaborators

Skip to main navigation. Skip to main content. The University of Chicago. H akyimlab github page. Office of International Affairs - H/J Visas. The University of Chicago. 2017 The University of Chicago. 900 East 57th Street. Chicago, IL 60637.

imlab.uchicago.edu imlab.uchicago.edu

MetaXcan manuscript on bioRxiv | Im-Lab | The University of Chicago

http://imlab.uchicago.edu/news/metaxcan-manuscript-biorxiv

Skip to main navigation. Skip to main content. The University of Chicago. MetaXcan manuscript on bioRxiv. H akyimlab github page. Office of International Affairs - H/J Visas. MetaXcan manuscript on bioRxiv. PrediXcan among top 3 in #TBICRI16/methods. Find our manuscript on genetic architecture of gene expression across tissues on BioRxiv. Find our Bipolar Disorder manuscript on BioRxiv. Multiple Openings in Genomic Data Science Lab. Published on Mar 23, 2016. The University of Chicago. Chicago, IL 60637.

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Useful functions and commands

Useful functions and commands. Thursday, July 23, 2015. Notes on decrypting dbGaP datasets. 1 Install aspera download from http:/ downloads.asperasoft.com/downloads. Select aspera connect and then show all installers). 2 Download using aspera working exampole download gtex to tarbell 11/25/214 (this didn’t work, cri-syncmon.cri.uchicago.edu. 4 get repository key. Ncbi/dbGaP-6981/) - from the working directory created by the ugly vdb-config run vbd-decrypt cd /Users/ haky. Saturday, October 4, 2014. In ra...

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From here and there

From here and there. Unlocking my iphone 2G. View my complete profile. Thursday, February 11, 2010. Unlocking my iphone 2G. Download pwnage 3.1.5 or the latest version. Run (will search for bootloader 4.6, or x.x). Pwnage will generate iphone.xx.ipsw. Follow instructions to put iphone in DFU mode (this may take a few attempts). Option-restore in itunes; select the iphone.xx.ipsw created by pwnage, then wait. Sunday, January 24, 2010. Chocolate Cake whole wheat. 2 ounces unsweetened chocolate. From http:/...

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hakya.com - This website is for sale! - hakya Resources and Information.

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